RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DEFA1P59665 94 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 DEFA3P59666 94 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 UBE2MP61081 183 aaKnown RBP5.02□□□□□ -1.61
CD44-204ENST00000279452 DHRS2Q13268 280 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 ACSM6Q6P461 480 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 Q6ZRM9 215 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 LYG2Q86SG7 212 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 OR52B4Q8NGK2 314 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 OR9G4Q8NGQ1 327 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 OR1P1Q8NH06 330 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 MRAPQ8TCY5 172 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 VN1R17PQ8TDU5 208 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 DTD1Q8TEA8 209 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 DYNLRB2Q8TF09 96 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 C21orf62Q9NYP8 219 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 TMED3Q9Y3Q3 217 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 DMRT1Q9Y5R6 373 aa5.02□□□□□ -1.61
CD44-204ENST00000279452 A0A1B0GU03 582 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 DUXBA0A1W2PPF3 345 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 FAM25EA8MYX2 175 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 CORTO00230 105 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 WRBO00258 174 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 NUPL2O15504 423 aaKnown RBP5.01□□□□□ -1.61
CD44-204ENST00000279452 TGOLN2O43493 480 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 GNG7O60262 68 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 SCGB2A1O75556 95 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 ADAP1O75689 374 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 YIF1AO95070 293 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 MT-CO2P00403 227 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 IAPPP10997 89 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 HTR2BP41595 481 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 MFAP2P55001 183 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 TNFRSF9Q07011 255 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 ASAH1Q13510 395 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 FAM106AQ4KMX7 169 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 NMSQ5H8A3 153 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 DEFB121Q5J5C9 76 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 GGNBP1Q5YKI7 109 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 C11orf87Q6NUJ2 197 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 SLC24A4Q8NFF2 622 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 OR52E5Q8NH55 327 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 ZNF502Q8TBZ5 544 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 SCARB1Q8WTV0 552 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 SEC22CQ9BRL7 303 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 MAGT1Q9H0U3 335 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 RBKSQ9H477 322 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 AURKAIP1Q9NWT8 199 aaPredicted RBP5.01□□□□□ -1.61
CD44-204ENST00000279452 ZMAT5Q9UDW3 170 aaKnown RBP5.01□□□□□ -1.61
CD44-204ENST00000279452 CACFD1Q9UGQ2 172 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 TBC1D24Q9ULP9 559 aa5.01□□□□□ -1.61
CD44-204ENST00000279452 IGHV3OR16-8A0A075B7F1 116 aa5□□□□□ -1.61
CD44-204ENST00000279452 RPS10-NUDT3A0A1W2PQS6 291 aa5□□□□□ -1.61
CD44-204ENST00000279452 K7EIM0 57 aa5□□□□□ -1.61
CD44-204ENST00000279452 CCSO14618 274 aa5□□□□□ -1.61
CD44-204ENST00000279452 MED6O75586 246 aa5□□□□□ -1.61
CD44-204ENST00000279452 IFNA4P05014 189 aa5□□□□□ -1.61
CD44-204ENST00000279452 RNASE2P10153 161 aaKnown RBP5□□□□□ -1.61
CD44-204ENST00000279452 NPY1RP25929 384 aa5□□□□□ -1.61
CD44-204ENST00000279452 INSL3P51460 131 aa5□□□□□ -1.61
CD44-204ENST00000279452 MFAP4P55083 255 aa5□□□□□ -1.61
CD44-204ENST00000279452 KRTAP10-11P60412 298 aa5□□□□□ -1.61
CD44-204ENST00000279452 KLF5Q13887 457 aaPredicted RBP5□□□□□ -1.61
CD44-204ENST00000279452 KPRPQ5T749 579 aaPredicted RBP5□□□□□ -1.61
CD44-204ENST00000279452 REC114Q7Z4M0 266 aa5□□□□□ -1.61
CD44-204ENST00000279452 NOXA1Q86UR1 476 aa5□□□□□ -1.61
CD44-204ENST00000279452 LRTM2Q8N967 370 aa5□□□□□ -1.61
CD44-204ENST00000279452 DUSP18Q8NEJ0 188 aa5□□□□□ -1.61
CD44-204ENST00000279452 BSCL2Q96G97 398 aaPredicted RBP5□□□□□ -1.61
CD44-204ENST00000279452 PRR25Q96S07 402 aa5□□□□□ -1.61
CD44-204ENST00000279452 PALMDQ9NP74 551 aa5□□□□□ -1.61
CD44-204ENST00000279452 GAR1Q9NY12 217 aaKnown RBP5□□□□□ -1.61
CD44-204ENST00000279452 GSKIPQ9P0R6 139 aa5□□□□□ -1.61
CD44-204ENST00000279452 HSPB7Q9UBY9 170 aa5□□□□□ -1.61
CD44-204ENST00000279452 SELENOKQ9Y6D0 94 aa5□□□□□ -1.61
CD44-204ENST00000279452 C5orf51A6NDU8 294 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 MPTX1A8MV57 137 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 INS-IGF2F8WCM5 200 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 H3BP45 60 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 I3L2K1 104 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 LCE2BO14633 110 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 ZNF207O43670 478 aaKnown RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 SSSCA1O60232 199 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 SPNP16150 400 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 NPBWR1P48145 328 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 RAB11AP62491 216 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 DCTN2Q13561 401 aaKnown RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 GUCA2BQ16661 112 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 IAH1Q2TAA2 248 aaPredicted RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 SPSB3Q6PJ21 355 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 NRARPQ7Z6K4 114 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 ZNF431Q8TF32 576 aaPredicted RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 CACNG8Q8WXS5 425 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 ACY3Q96HD9 319 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 CHRDL1Q9BU40 450 aa4.99□□□□□ -1.61
CD44-204ENST00000279452 GPN1Q9HCN4 374 aaPredicted RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 ZNF256Q9Y2P7 627 aaPredicted RBP4.99□□□□□ -1.61
CD44-204ENST00000279452 UFC1Q9Y3C8 167 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 232.3 ms