RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 RPL29P47914 159 aaKnown RBP17.57■□□□□ 0.4
CCDC7-201ENST00000277657 MIC13Q5XKP0 118 aa17.57■□□□□ 0.4
CCDC7-201ENST00000277657 ACTR3CQ9C0K3 210 aaPredicted RBP17.57■□□□□ 0.4
CCDC7-201ENST00000277657 FNDC4Q9H6D8 234 aaPredicted RBP17.57■□□□□ 0.4
CCDC7-201ENST00000277657 IGKV1OR2-108A0A075B7D4 117 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 SEC14L6B5MCN3 397 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 OR1P1Q8NH06 330 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 RARRES2Q99969 163 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 SLC25A22Q9H936 323 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 MAP1AP78559 2803 aaPredicted RBP17.56■□□□□ 0.4
CCDC7-201ENST00000277657 B4DSR2 109 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 CYB5BO43169 146 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 FAM106CPP0CH98 169 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 BRS3P32247 399 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 MFAP2P55001 183 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 PRR20EP86478 221 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 PRR20CP86479 221 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 PRR20DP86480 221 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 PRR20BP86481 221 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 PRR20AP86496 221 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 SSMEM1Q8WWF3 244 aa17.56■□□□□ 0.4
CCDC7-201ENST00000277657 BEX4Q9NWD9 120 aaPredicted RBP17.56■□□□□ 0.4
CCDC7-201ENST00000277657 IGHV1-69DA0A0B4J2H0 117 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 SCO1O75880 301 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 IGHV1-69P01742 117 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 TMEM11P17152 192 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 FGF8P55075 233 aaPredicted RBP17.55■□□□□ 0.4
CCDC7-201ENST00000277657 PMS2P11Q13670 270 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 GCSAMLQ5JQS6 135 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 ZNF506Q5JVG8 444 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 FAM122CQ6P4D5 195 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 RAB24Q969Q5 203 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 SLC35E1Q96K37 410 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 SLC45A2Q9UMX9 530 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 F11RQ9Y624 299 aaKnown RBP17.55■□□□□ 0.4
CCDC7-201ENST00000277657 POLQO75417 2590 aa17.55■□□□□ 0.4
CCDC7-201ENST00000277657 CNIH1O95406 144 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 B2MP61769 119 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 FAM120AOSQ5T036 256 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 STPG3Q8N7X2 389 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 OR2T6Q8NHC8 308 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 APELAP0DMC3 54 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 PPT1P50897 306 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 HAGHQ16775 308 aa17.54■□□□□ 0.4
CCDC7-201ENST00000277657 EIF3GO75821 320 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC7-201ENST00000277657 CRYGCP07315 174 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 LINC00869P0C866 280 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 CDC34P49427 236 aaPredicted RBP17.53■□□□□ 0.4
CCDC7-201ENST00000277657 DEFA5Q01523 94 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 ICAM4Q14773 271 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 FXYD3Q14802 87 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 ZNF562Q6V9R5 426 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 LRRC75A-AS1Q8N1F1 130 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 SLC35B3Q9H1N7 401 aa17.53■□□□□ 0.4
CCDC7-201ENST00000277657 NCBP2LA6PVI3 153 aaKnown RBP17.52■□□□□ 0.4
CCDC7-201ENST00000277657 DEFA4P12838 97 aa17.52■□□□□ 0.4
CCDC7-201ENST00000277657 GUCA2BQ16661 112 aa17.52■□□□□ 0.4
CCDC7-201ENST00000277657 DEFB113Q30KQ7 82 aa17.52■□□□□ 0.4
CCDC7-201ENST00000277657 C19orf35Q6ZS72 473 aa17.52■□□□□ 0.4
CCDC7-201ENST00000277657 GNG13Q9P2W3 67 aa17.52■□□□□ 0.4
CCDC7-201ENST00000277657 TRAV20A0A0B4J274 112 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 TRAV40A0A0B4J280 105 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 LOC102723971A0A1B0GUV8 181 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 CORTO00230 105 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 KHDC3LQ587J8 217 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 RUSC1-AS1Q66K80 236 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 SVBPQ8N300 66 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 ACY3Q96HD9 319 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 DMRT1Q9Y5R6 373 aa17.52■□□□□ 0.39
CCDC7-201ENST00000277657 GATA3P23771 443 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 OR10J1P30954 320 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 TMEM249Q2WGJ8 235 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 ETFRF1Q6IPR1 90 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 ATRAIDQ6UW56 229 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 Q8N9W7 124 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 C7orf69Q9H7B7 122 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 HIF1ANQ9NWT6 349 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 C1RLQ9NZP8 487 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 ABCA12Q86UK0 2595 aa17.51■□□□□ 0.39
CCDC7-201ENST00000277657 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
CCDC7-201ENST00000277657 HSPB1P04792 205 aaKnown RBP17.5■□□□□ 0.39
CCDC7-201ENST00000277657 BCL2P10415 239 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 CTRB1P17538 263 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 CX3CL1P78423 397 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 CTRB2Q6GPI1 263 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 THAP8Q8NA92 274 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 MISP3Q96FF7 219 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 MRPL36Q9P0J6 103 aaKnown RBP17.5■□□□□ 0.39
CCDC7-201ENST00000277657 IGHV3OR16-10A0A075B7F0 116 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 ABHD5Q8WTS1 349 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 NPIPB3Q92617 1050 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 PSMG3-AS1Q96PY0 264 aa17.5■□□□□ 0.39
CCDC7-201ENST00000277657 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC7-201ENST00000277657 A0A1W2PPV4 95 aa17.49■□□□□ 0.39
CCDC7-201ENST00000277657 SRP19P09132 144 aaKnown RBP17.49■□□□□ 0.39
CCDC7-201ENST00000277657 IGHV4-38-2P0DP08 117 aa17.49■□□□□ 0.39
CCDC7-201ENST00000277657 LINC01356Q8N9X3 169 aa17.49■□□□□ 0.39
CCDC7-201ENST00000277657 APCP25054 2843 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 ZFP92A6NM28 416 aa17.48■□□□□ 0.39
CCDC7-201ENST00000277657 LOXL1Q08397 574 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms