RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 NXF2Q9GZY0 626 aaKnown RBP10.45□□□□□ -0.74
COMMD4-201ENST00000267935 FAM212BQ9NTI7 297 aaPredicted RBP10.45□□□□□ -0.74
COMMD4-201ENST00000267935 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-201ENST00000267935 PMP2P02689 132 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 RPS19P39019 145 aaKnown RBP10.44□□□□□ -0.74
COMMD4-201ENST00000267935 NPBWR1P48145 328 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 TSPAN5P62079 268 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 CTF1Q16619 201 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 TMEM231Q9H6L2 316 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
COMMD4-201ENST00000267935 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 C15orf61A6NNL5 157 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 ST8SIA3O43173 380 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 MT-CO2P00403 227 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 CA1P00915 261 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-201ENST00000267935 PRSS3P35030 304 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 TMEM41BQ5BJD5 291 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 FAM90A2PQ658T7 463 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
COMMD4-201ENST00000267935 PINX1Q96BK5 328 aaKnown RBP10.43□□□□□ -0.74
COMMD4-201ENST00000267935 TRAV2A0A0B4J234 112 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 A0A1W2PS18 150 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 I3L2K1 104 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 SNCAP37840 140 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 TMBIM6P55061 237 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 HSPE1P61604 102 aaKnown RBP10.42□□□□□ -0.74
COMMD4-201ENST00000267935 ZNF124Q15973 351 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 STHQ8IWL8 128 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
COMMD4-201ENST00000267935 IGHV3OR16-13A0A075B7E8 117 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 IGHV3-74A0A0B4J1X5 117 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 SMIM31A0A1B0GVY4 71 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 IGLL5B9A064 214 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 NAT1P18440 290 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.74
COMMD4-201ENST00000267935 DEFB131AP59861 70 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 PHLDA2Q53GA4 152 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 UBE2NLQ5JXB2 153 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 ZNF114Q8NC26 417 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
COMMD4-201ENST00000267935 BCL7BQ9BQE9 202 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 MS4A6AQ9H2W1 248 aa10.41□□□□□ -0.74
COMMD4-201ENST00000267935 ATG12O94817 140 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 NPPCP23582 126 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 RORCP51449 518 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 TAS2R20P59543 309 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 PRCDQ00LT1 54 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 TOMM20LQ6UXN7 152 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 HRH4Q9H3N8 390 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 VSIRQ9H7M9 311 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 RABAC1Q9UI14 185 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.74
COMMD4-201ENST00000267935 DBX1A6NMT0 343 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 CORTO00230 105 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 DEFB4AO15263 64 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 IGHV3-48P01763 117 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 HRH1P35367 487 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 SPCS2Q15005 226 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-201ENST00000267935 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 SAMD12Q8N8I0 201 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 ST8SIA2Q92186 375 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 SEC22AQ96IW7 307 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 PDCD10Q9BUL8 212 aa10.39□□□□□ -0.75
COMMD4-201ENST00000267935 TMEM50AO95807 157 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 SPP1P10451 314 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 MIFP14174 115 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 EIF2B2P49770 351 aaKnown RBP10.38□□□□□ -0.75
COMMD4-201ENST00000267935 UCP3P55916 312 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 LYSMD2Q8IV50 215 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 AP3S1Q92572 193 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 METTL26Q96S19 204 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 FXYD6Q9H0Q3 95 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 ENY2Q9NPA8 101 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 COMMD3Q9UBI1 195 aa10.38□□□□□ -0.75
COMMD4-201ENST00000267935 PUS1Q9Y606 427 aaKnown RBP eCLIP10.38□□□□□ -0.75
COMMD4-201ENST00000267935 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 H3BMQ9 156 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 IFNA17P01571 189 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 ZNF182P17025 639 aaPredicted RBP10.37□□□□□ -0.75
COMMD4-201ENST00000267935 MZT2AQ6P582 158 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 TMEM230Q96A57 120 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 RSL24D1Q9UHA3 163 aaKnown RBP10.37□□□□□ -0.75
COMMD4-201ENST00000267935 APLNQ9ULZ1 77 aa10.37□□□□□ -0.75
COMMD4-201ENST00000267935 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
COMMD4-201ENST00000267935 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
COMMD4-201ENST00000267935 STXBP6Q8NFX7 210 aa10.36□□□□□ -0.75
COMMD4-201ENST00000267935 MRGPRFQ96AM1 343 aa10.36□□□□□ -0.75
COMMD4-201ENST00000267935 SCPEP1Q9HB40 452 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms