RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 SH3BGRL3Q9H299 93 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 A0A087WV48 116 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 H3BTX0 84 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 DOCK9Q9BZ29 2069 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 FOXI3A8MTJ6 420 aaPredicted RBP11.51□□□□□ -0.57
CDH1-201ENST00000261769 C1QL1O75973 258 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 WISP1O95388 367 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 FAM53AQ6NSI3 398 aaPredicted RBP11.51□□□□□ -0.57
CDH1-201ENST00000261769 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
CDH1-201ENST00000261769 MYOZ3Q8TDC0 251 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 NPCDR1Q9BY65 106 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
CDH1-201ENST00000261769 TRAV14DV4A0A0A6YYC5 116 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 IGFBP2P18065 325 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
CDH1-201ENST00000261769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
CDH1-201ENST00000261769 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 CD8AP01732 235 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 PRSS8Q16651 343 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 LDLRAD2Q5SZI1 272 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 CYB561D1Q8N8Q1 229 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 VOPP1Q96AW1 172 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 GBF1Q92538 1859 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
CDH1-201ENST00000261769 DUSP14O95147 198 aaKnown RBP11.5□□□□□ -0.57
CDH1-201ENST00000261769 GATA4P43694 442 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
CDH1-201ENST00000261769 IGKV1D-17A0A075B6S4 117 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 J3QLI3 93 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 APCSP02743 223 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 CD99P14209 185 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 CRYBB3P26998 211 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 IER3P46695 156 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 LHFPL5Q8TAF8 219 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 OTOGLQ3ZCN5 2332 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 NAPSAO96009 420 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 TRBV6-6A0A0A6YYG2 114 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 MT-ND6P03923 174 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 CD5P06127 495 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 Q1RN00 199 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 Q8TCH9 128 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 BEX4Q9NWD9 120 aaPredicted RBP11.49□□□□□ -0.57
CDH1-201ENST00000261769 HLA-DRB1P01911 266 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 PAX8Q06710 450 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 C5orf64Q2M2E5 130 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 STHQ8IWL8 128 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
CDH1-201ENST00000261769 KLF2Q9Y5W3 355 aaPredicted RBP11.49□□□□□ -0.57
CDH1-201ENST00000261769 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
CDH1-201ENST00000261769 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 C2orf68Q2NKX9 166 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 RNF125Q96EQ8 232 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 GCGP01275 180 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 NR2C2APQ86WQ0 139 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 M0R2Z0 102 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 SCO1O75880 301 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 A0A0A6YYD4 124 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 SAA4P35542 130 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 UBE2E1P51965 193 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 OR1P1Q8NH06 330 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 CHAC2Q8WUX2 184 aa11.48□□□□□ -0.57
CDH1-201ENST00000261769 HERPUD1Q15011 391 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 LINC00527Q9UJ94 153 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 A0A0B4J293 547 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 F8VVB4 439 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 F8VWA3 439 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 CKS2P33552 79 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 TMEM97Q5BJF2 176 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
CDH1-201ENST00000261769 CD300CQ08708 224 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 CR1LQ2VPA4 569 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 Q6P435 159 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 SPSB3Q6PJ21 355 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 H7C1H1 209 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 DANCRP0C864 163 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 NIT2Q9NQR4 276 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
CDH1-201ENST00000261769 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms