RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ROBO3Q96MS0 1386 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 hCG_1818297A0A087WSY0 165 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 TRGV5A0A0B4J1U4 118 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 A8MT66 165 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 KLRC4O43908 158 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 C8GP07360 202 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 P0C880 135 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 C9orf64Q5T6V5 341 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 ZNF705AQ6ZN79 300 aaPredicted RBP3.31□□□□□ -1.88
RFC1-217ENST00000639695 SLC35E3Q7Z769 313 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 MRPS24Q96EL2 167 aaKnown RBP3.31□□□□□ -1.88
RFC1-217ENST00000639695 GID8Q9NWU2 228 aa3.31□□□□□ -1.88
RFC1-217ENST00000639695 DOCK5Q9H7D0 1870 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 ZSWIM8A7E2V4 1837 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 CASZ1Q86V15 1759 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 NLRP1Q9C000 1473 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 SETD5Q9C0A6 1442 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 IGKV3D-11A0A0A0MRZ8 115 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 IRGMA1A4Y4 181 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 GGT3PA6NGU5 568 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 SMIM10L2AP0DMW4 78 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 SMIM10L2BP0DMW5 78 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 GZMHP20718 246 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 PPIBP23284 216 aaKnown RBP3.3□□□□□ -1.88
RFC1-217ENST00000639695 ERP29P30040 261 aaKnown RBP3.3□□□□□ -1.88
RFC1-217ENST00000639695 B2MP61769 119 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 RPL18Q07020 188 aaKnown RBP3.3□□□□□ -1.88
RFC1-217ENST00000639695 TAF9Q16594 264 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 ARHGAP11BQ3KRB8 267 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 AADACL3Q5VUY0 350 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 LYG2Q86SG7 212 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 ZNF471Q9BX82 626 aaPredicted RBP3.3□□□□□ -1.88
RFC1-217ENST00000639695 TIMM9Q9Y5J7 89 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 RALGAPA2Q2PPJ7 1873 aa3.3□□□□□ -1.88
RFC1-217ENST00000639695 THOC2Q8NI27 1593 aaKnown RBP3.29□□□□□ -1.88
RFC1-217ENST00000639695 CCDC88BA6NC98 1476 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 MYOM3Q5VTT5 1437 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 KIF24Q5T7B8 1368 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 ATG12O94817 140 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 CYBAP13498 195 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 HLA-DMBP28068 263 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 TPI1P60174 286 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 MEF2BQ02080 365 aaPredicted RBP3.29□□□□□ -1.88
RFC1-217ENST00000639695 PABPC1L2AQ5JQF8 200 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 IBA57Q5T440 356 aaKnown RBP3.29□□□□□ -1.88
RFC1-217ENST00000639695 IMMP2LQ96T52 175 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 YIPF3Q9GZM5 350 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
RFC1-217ENST00000639695 ERBINQ96RT1 1412 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 FABP5P3A8MUU1 101 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 ODF3BA8MYP8 253 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 ZNF682O95780 498 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 MSMBP08118 114 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 CCR2P41597 374 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 GABRA4P48169 554 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 HSPE1P61604 102 aaKnown RBP3.28□□□□□ -1.88
RFC1-217ENST00000639695 S100A12P80511 92 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 AGTRAPQ6RW13 159 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 ZNF767PQ75MW2 155 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 OR11H6Q8NGC7 330 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 NEK7Q8TDX7 302 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 GPR146Q96CH1 333 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 DERL1Q9BUN8 251 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 PYCARDQ9ULZ3 195 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 GOLGA3Q08378 1498 aa3.28□□□□□ -1.88
RFC1-217ENST00000639695 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
RFC1-217ENST00000639695 IFNA1P01562 189 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 IGKV1-5P01602 117 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 IGHV3-7P01780 117 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 TFPTP0C1Z6 253 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 SULT1A3P0DMM9 295 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 SULT1A4P0DMN0 295 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 HINT1P49773 126 aaPredicted RBP3.27□□□□□ -1.89
RFC1-217ENST00000639695 SPANXN3Q5MJ09 141 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 TRIQKQ629K1 86 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 GOLT1AQ6ZVE7 132 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 FAM172AQ8WUF8 416 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 SLC7A6Q92536 515 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 C8orf4Q9NR00 106 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 NAT8Q9UHE5 227 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 HHLA3Q9XRX5 114 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 RBM7Q9Y580 266 aaKnown RBP3.27□□□□□ -1.89
RFC1-217ENST00000639695 TIMM22Q9Y584 194 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 CAMSAP2Q08AD1 1489 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 WDR7Q9Y4E6 1490 aa3.27□□□□□ -1.89
RFC1-217ENST00000639695 WDR97A6NE52 1622 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 SHROOM2Q13796 1616 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 PRDM15P57071 1507 aaPredicted RBP3.26□□□□□ -1.89
RFC1-217ENST00000639695 ABCA10Q8WWZ4 1543 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 H3BT86 120 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 HMGB3O15347 200 aaKnown RBP3.26□□□□□ -1.89
RFC1-217ENST00000639695 IGKV4-1P06312 121 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 RAB14P61106 215 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 MOGQ16653 247 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 HCP5Q6MZN7 132 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms