RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 ZNF436Q9C0F3 470 aaPredicted RBP12.24□□□□□ -0.45
COLCA2-207ENST00000639470 PALMDQ9NP74 551 aa12.24□□□□□ -0.45
COLCA2-207ENST00000639470 C21orf62Q9NYP8 219 aa12.24□□□□□ -0.45
COLCA2-207ENST00000639470 UBQLN2Q9UHD9 624 aa12.24□□□□□ -0.45
COLCA2-207ENST00000639470 IGHV3-49A0A0A0MS15 119 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 CTDSP2O14595 271 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 C8orf88P0DMB2 117 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 SP6Q3SY56 376 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 LAX1Q8IWV1 398 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 OR52B4Q8NGK2 314 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 VN1R17PQ8TDU5 208 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 MISP3Q96FF7 219 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
COLCA2-207ENST00000639470 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 FGF2P09038 288 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 ZNF182P17025 639 aaPredicted RBP12.22□□□□□ -0.45
COLCA2-207ENST00000639470 ALDH3B2P48448 385 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 UCP3P55916 312 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 Q56UQ5 140 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 RNASE10Q5GAN6 216 aaKnown RBP12.22□□□□□ -0.45
COLCA2-207ENST00000639470 H2BFWTQ7Z2G1 175 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 LHFPL1Q86WI0 220 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
COLCA2-207ENST00000639470 PIGPP57054 158 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 MZT2AQ6P582 158 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 OR2C3Q8N628 320 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 OR5B3Q8NH48 314 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 THYN1Q9P016 225 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 MTFP1Q9UDX5 166 aa12.21□□□□□ -0.45
COLCA2-207ENST00000639470 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.46
COLCA2-207ENST00000639470 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 I3L2K1 104 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 CTSGP08311 255 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 P0C879 139 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
COLCA2-207ENST00000639470 OR13C8Q8NGS7 320 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 PINX1Q96BK5 328 aaKnown RBP12.2□□□□□ -0.46
COLCA2-207ENST00000639470 BSCL2Q96G97 398 aaPredicted RBP12.2□□□□□ -0.46
COLCA2-207ENST00000639470 MRPL27Q9P0M9 148 aaKnown RBP12.2□□□□□ -0.46
COLCA2-207ENST00000639470 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
COLCA2-207ENST00000639470 A0A0B4J293 547 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 MT-CO2P00403 227 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 IFNA6P05013 189 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 ZNF124Q15973 351 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 HSD17B13Q7Z5P4 300 aaPredicted RBP12.19□□□□□ -0.46
COLCA2-207ENST00000639470 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 TMEM56Q96MV1 263 aa12.19□□□□□ -0.46
COLCA2-207ENST00000639470 MRPS26Q9BYN8 205 aaKnown RBP12.19□□□□□ -0.46
COLCA2-207ENST00000639470 DYNC2H1Q8NCM8 4307 aaKnown RBP12.18□□□□□ -0.46
COLCA2-207ENST00000639470 LCE6AA0A183 80 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 RGS5O15539 181 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 RAB3DO95716 219 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 RND3P61587 244 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
COLCA2-207ENST00000639470 GPR141Q7Z602 305 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 CLVS1Q8IUQ0 354 aaPredicted RBP12.18□□□□□ -0.46
COLCA2-207ENST00000639470 CADM3Q8N126 398 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 OR1P1Q8NH06 330 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 AP3S1Q92572 193 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 TSC22D3Q99576 134 aa12.18□□□□□ -0.46
COLCA2-207ENST00000639470 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
COLCA2-207ENST00000639470 MRPL36Q9P0J6 103 aaKnown RBP12.18□□□□□ -0.46
COLCA2-207ENST00000639470 STARD9Q9P2P6 4700 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 NDUFA4O00483 81 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 CD74P04233 296 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 S100GP29377 79 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
COLCA2-207ENST00000639470 EWSR1Q01844 656 aaKnown RBP eCLIP12.17□□□□□ -0.46
COLCA2-207ENST00000639470 MLANAQ16655 118 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 Q6ZRM9 215 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 TMEM229BQ8NBD8 167 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 LHFPL5Q8TAF8 219 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 RNF2Q99496 336 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 OVOL2Q9BRP0 275 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 GGTLC1Q9BX51 225 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 C5orf66Q9H5L9 145 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 FAM212BQ9NTI7 297 aaPredicted RBP12.17□□□□□ -0.46
COLCA2-207ENST00000639470 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
COLCA2-207ENST00000639470 CYB5BO43169 146 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 YIF1AO95070 293 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
COLCA2-207ENST00000639470 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
COLCA2-207ENST00000639470 ETV6P41212 452 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 TFPI2P48307 235 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 AKR1C2P52895 323 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms