RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 GNB1LQ9BYB4 327 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 CHODLQ9H9P2 273 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 PRR13Q9NZ81 148 aa16.58■□□□□ 0.24
CACNA1A-257ENST00000638009 A0A1W2PRS3 328 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 METTL12A8MUP2 240 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 LRP10Q7Z4F1 713 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 PNKDQ8N490 385 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 FOXQ1Q9C009 403 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 GTSCR1Q86UQ5 136 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 APCDD1LQ8NCL9 501 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 CALYQ9NYX4 217 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 NHSQ6T4R5 1651 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 CDC42EP2O14613 210 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 LHX9Q9NQ69 397 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 TCF20Q9UGU0 1960 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 GDF15Q99988 308 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 IGKCP01834 107 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 IDI2-AS1Q9NZ38 188 aa16.57■□□□□ 0.24
CACNA1A-257ENST00000638009 IGLV3-25P01717 112 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 CXCL2P19875 107 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 SELENOHQ8IZQ5 122 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 TRAV5A0A0B4J249 113 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 WFDC5Q8TCV5 224 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 LIFP15018 202 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 CYP2G1PQ6ZSU1 146 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 OR9G1Q8NH87 305 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 JPT1Q9UK76 154 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 TRAV2A0A0B4J234 112 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 CCL21O00585 134 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 ZNHIT1O43257 154 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 CD5LO43866 347 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 PEX11BO96011 259 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 MOSP00540 346 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 ATP5L2Q7Z4Y8 100 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 GATD1Q8NB37 220 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 PMS2CLQ68D20 193 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 PLPPR1Q8TBJ4 325 aa16.56■□□□□ 0.24
CACNA1A-257ENST00000638009 C9orf153Q5TBE3 101 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 AHRRA9YTQ3 701 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 TRIP6Q15654 476 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 NHLRC3Q5JS37 347 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 OCIAD2Q56VL3 154 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 C2orf82Q6UX34 121 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
CACNA1A-257ENST00000638009 IGHV5-51A0A0C4DH38 117 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 TGFAP01135 160 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 Q6ZNB5 142 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 CHTOPQ9Y3Y2 248 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 LAGE3Q14657 143 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 ZNF124Q15973 351 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 CXCL16Q9H2A7 254 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 UNC119Q13432 240 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 AQP3Q92482 292 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 EPDR1Q9UM22 224 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 ICAM4Q14773 271 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 LINC01587Q99440 93 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 ZNF205O95201 554 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 ASB1Q9Y576 335 aa16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 TRPM3Q9HCF6 1732 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-257ENST00000638009 GFRA3O60609 400 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 MDKP21741 143 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 CMC4P56277 68 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 RASL11AQ6T310 242 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 TSPAN7P41732 249 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 CEP192Q8TEP8 1941 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 OR2H2O95918 312 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 KLHDC9Q8NEP7 349 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 NTN1O95631 604 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 TMEM54Q969K7 222 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 PLEKHB2Q96CS7 222 aa16.53■□□□□ 0.24
CACNA1A-257ENST00000638009 LOC105371242A0A075B767 164 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 OR52E5Q8NH55 327 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 LILRA1O75019 489 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 CD5P06127 495 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 RNASE4P34096 147 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 MAGEA5P43359 124 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 TMEM167AQ8TBQ9 72 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 CCDC168Q8NDH2 2452 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 ABCA2Q9BZC7 2435 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 LDLRAD4O15165 306 aa16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 ZFP36L2P47974 494 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-257ENST00000638009 TMEM8BA6NDV4 472 aa16.52■□□□□ 0.23
CACNA1A-257ENST00000638009 NDUFC2O95298 119 aa16.52■□□□□ 0.23
CACNA1A-257ENST00000638009 SLC50A1Q9BRV3 221 aa16.52■□□□□ 0.23
CACNA1A-257ENST00000638009 ADARB2-AS1A8MUL3 147 aa16.52■□□□□ 0.23
CACNA1A-257ENST00000638009 CCL19Q99731 98 aa16.52■□□□□ 0.23
CACNA1A-257ENST00000638009 UPK2O00526 184 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 FABP5P3A8MUU1 101 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 CD28P10747 220 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 OR10W1Q8NGF6 305 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 TCF19Q9Y242 345 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 TCRBV5S1A1TA0A578 114 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 PGLYRP1O75594 196 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 ITLN2Q8WWU7 325 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms