RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SHISA2Q6UWI4 295 aa15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 WIPF2Q8TF74 440 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 CHAC2Q8WUX2 184 aa15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 CIB3Q96Q77 187 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 HIPK2Q9H2X6 1198 aa15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 HEYLQ9NQ87 328 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 RCL1Q9Y2P8 373 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-221ENST00000622702 hCG_2014768A0A024R1R8 64 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 PSMB11A5LHX3 300 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 K7EPK0 472 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 WRBO00258 174 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 SOX15O60248 233 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 IGHG4P01861 327 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 KRTAP10-3P60369 221 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 RAB32Q13637 225 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 CENPVQ7Z7K6 275 aaPredicted RBP15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 ZNF114Q8NC26 417 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 OR5T1Q8NG75 326 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 PPP1R1CQ8WVI7 109 aa15.52■□□□□ 0.07
PDLIM2-221ENST00000622702 BRI3O95415 125 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 IGLV1-40P01703 118 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 REG1AP05451 166 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 KLK9Q2XQG4 91 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 BSXQ3C1V8 233 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 ZNF329Q86UD4 541 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 KLHDC1Q8N7A1 406 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 RAB40CQ96S21 281 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 KLK9Q9UKQ9 250 aa15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 F11RQ9Y624 299 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-221ENST00000622702 H3BUA1 57 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 SSSCA1O60232 199 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 HTR2BP41595 481 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 BCAP31P51572 246 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 RAP2BP61225 183 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 C11orf87Q6NUJ2 197 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 COMMD1Q8N668 190 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 P2RX4Q99571 388 aa15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 LSM5Q9Y4Y9 91 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-221ENST00000622702 RNASE2P10153 161 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 IAPPP10997 89 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 SNCAP37840 140 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 TAS2R30P59541 319 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 S100A10P60903 97 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 TEX38Q6PEX7 206 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 C10orf99Q6UWK7 81 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 SLC24A4Q8NFF2 622 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 OR1L6Q8NGR2 347 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 OR1P1Q8NH06 330 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 SMIM8Q96KF7 97 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 C11orf1Q9H5F2 150 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 U3KQ87 197 aa15.49■□□□□ 0.07
PDLIM2-221ENST00000622702 TMEM50AO95807 157 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 ELANEP08246 267 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 PSMB8P28062 276 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 PAX9P55771 341 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 ATP5IP56385 69 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 FOXE3Q13461 319 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 LRRC37A5PQ49AS3 106 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 PVRIGQ6DKI7 326 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 C19orf35Q6ZS72 473 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 RNF152Q8N8N0 203 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 CITED1Q99966 193 aa15.48■□□□□ 0.07
PDLIM2-221ENST00000622702 DEDDO75618 318 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 MPC2O95563 127 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 DEFA4P12838 97 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 SUB1P53999 127 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 C2orf83Q53S99 150 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 OR5AU1Q8NGC0 362 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 FANCD2OSQ96PS1 177 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 SLA2Q9H6Q3 261 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 DMRT1Q9Y5R6 373 aa15.47■□□□□ 0.07
PDLIM2-221ENST00000622702 IGLV11-55A0A075B6I3 123 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 TRBV9A0A0B4J1U6 114 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 H0YIZ8 118 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 CYB5BO43169 146 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 TSC22D2O75157 780 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 RLN2P04090 185 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 PET100P0DJ07 73 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 HIST1H1BP16401 226 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 PVALBP20472 110 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 NPY1RP25929 384 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 MFAP2P55001 183 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 CD83Q01151 205 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 NOXA1Q86UR1 476 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 TMEM170AQ8WVE7 144 aa15.46■□□□□ 0.07
PDLIM2-221ENST00000622702 L7N2F9 121 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 IFNA10P01566 189 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 PRH1P02810 166 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 PF4V1P10720 104 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 VAMP2P63027 116 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 RPP30P78346 268 aaKnown RBP15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 FGL1Q08830 312 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 OR4X2Q8NGF9 303 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 RNF126Q9BV68 326 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 KLK15Q9H2R5 256 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 ZNF355PQ9NSJ1 428 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 PSENENQ9NZ42 101 aa15.46■□□□□ 0.06
PDLIM2-221ENST00000622702 C15orf62A8K5M9 175 aa15.45■□□□□ 0.06
PDLIM2-221ENST00000622702 RAB9AP51151 201 aa15.45■□□□□ 0.06
PDLIM2-221ENST00000622702 RPL23AP62750 156 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms