RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SUPT4H1P63272 117 aaKnown RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 MEF2CQ06413 473 aaPredicted RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 AESQ08117 197 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 ANKRD55Q3KP44 614 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 STUMQ69YW2 141 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 PRSS54Q6PEW0 395 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 ZNF818PQ6ZRF7 136 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 ACOT7LQ6ZUV0 252 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 TMUB2Q71RG4 321 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CD177Q8N6Q3 437 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CSNK1G2-AS1Q8NCQ2 148 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 KLHL30-AS1Q8NEE0 82 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 DEFB108BQ8NET1 73 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 OR10A7Q8NGE5 316 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 ANGPTL6Q8NI99 470 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CD300LFQ8TDQ1 290 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 PPP1R1CQ8WVI7 109 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 RAB1CQ92928 201 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 RBPMSQ93062 196 aaKnown RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 MRGPRFQ96AM1 343 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 COQ2Q96H96 371 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 SEC22AQ96IW7 307 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CLCC1Q96S66 551 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 HSD17B10Q99714 261 aaKnown RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 ARL6Q9H0F7 186 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 TMEM222Q9H0R3 208 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 OR2D2Q9H210 308 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 JPT2Q9H910 190 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CCL28Q9NRJ3 127 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 FAM212BQ9NTI7 297 aaPredicted RBP3.71□□□□□ -1.82
VPS29-212ENST00000621131 CBLN4Q9NTU7 201 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 TMEM106BQ9NUM4 274 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 TAS2R3Q9NYW6 316 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 GSKIPQ9P0R6 139 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 PIPOXQ9P0Z9 390 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 CACFD1Q9UGQ2 172 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 UBQLN2Q9UHD9 624 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 PRELID3BQ9Y3B1 194 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 MAB21L2Q9Y586 359 aa3.71□□□□□ -1.82
VPS29-212ENST00000621131 NBEAL2Q6ZNJ1 2754 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 BORCS7-ASMTA0A0B4J1R7 106 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TRAV39A0A0B4J263 110 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 A0A1W2PRV1 198 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 C12orf77C9JDV5 145 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 E5RGE8 158 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 K7EPK0 472 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 ITGB1BP1O14713 200 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TAAR5O14804 337 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 ST8SIA3O43173 380 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 YPEL1O60688 119 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 ZNF737O75373 536 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 PGLYRP1O75594 196 aaPredicted RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 ADAP1O75689 374 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 MPC2O95563 127 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 GYPAP02724 150 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 WNT2P09544 360 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 SLC25A6P12236 298 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 VDAC1P21796 283 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 F2RP25116 425 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 UCP1P25874 307 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 IL3RAP26951 378 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 SNTB1Q13884 538 aaKnown RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 HERPUD1Q15011 391 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 LY6G6FQ5SQ64 297 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 EIF5AL1Q6IS14 154 aaKnown RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 REG3GQ6UW15 175 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 SLC51BQ86UW2 128 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 FAM219AQ8IW50 185 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 FAM71E2Q8N5Q1 922 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 ZNRF1Q8ND25 227 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR8B3Q8NGG8 313 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR52M1Q8NGK5 317 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR8U1Q8NH10 309 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR51H1Q8NH63 302 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR1S1Q8NH92 325 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR1L1Q8NH94 360 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 LRRC20Q8TCA0 184 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TCTEX1D2Q8WW35 142 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 H1FXQ92522 213 aaKnown RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 CCL17Q92583 94 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 ADTRPQ96IZ2 230 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TMEM56Q96MV1 263 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 GAFA1Q96PS6 74 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR8B2Q96RD0 313 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 CCL13Q99616 98 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 SLC25A31Q9H0C2 315 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TOLLIPQ9H0E2 274 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 PLSCR3Q9NRY6 295 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 CALYQ9NYX4 217 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 IDI2-AS1Q9NZ38 188 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 OR1A1Q9P1Q5 309 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 MBD2Q9UBB5 411 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TNFSF18Q9UNG2 199 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 NSG2Q9Y328 171 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 LSM5Q9Y4Y9 91 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms