RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CLEC7AQ9BXN2 247 aa11.56□□□□□ -0.56
CNOT3-210ENST00000618939 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 H3BTX0 84 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 SAA1P0DJI8 122 aaPredicted RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 COMPP49747 757 aaPredicted RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 PEAR1Q5VY43 1037 aaPredicted RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 NCOA6Q14686 2063 aaPredicted RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 TMSB15BA0A087X1C1 80 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 ANOS1P23352 680 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 BPIFA4PQ86YQ2 179 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 SSC4DQ8WTU2 575 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 MBNL3Q9NUK0 354 aaKnown RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 RALYQ9UKM9 306 aaKnown RBP11.55□□□□□ -0.56
CNOT3-210ENST00000618939 CACNG8Q8WXS5 425 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 IMMP2LQ96T52 175 aa11.55□□□□□ -0.56
CNOT3-210ENST00000618939 ZNF503-AS2A6NEH8 195 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 PGPEP1LA6NFU8 196 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 GPR6P46095 362 aaPredicted RBP11.54□□□□□ -0.56
CNOT3-210ENST00000618939 TREML4Q6UXN2 200 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 LINC00473A8K010 186 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 CA7P43166 264 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 LINC00305Q7Z4B0 112 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 OR52E5Q8NH55 327 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 B9A039 149 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 ZCCHC24Q8N2G6 241 aaKnown RBP11.54□□□□□ -0.56
CNOT3-210ENST00000618939 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 CRIM1Q9NZV1 1036 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 PCDH15Q96QU1 1955 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 F2RL2O00254 374 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 C10orf91Q5T1B1 145 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 REC114Q7Z4M0 266 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 CYYR1Q96J86 154 aa11.54□□□□□ -0.56
CNOT3-210ENST00000618939 GSX1Q9H4S2 264 aaPredicted RBP11.54□□□□□ -0.56
CNOT3-210ENST00000618939 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
CNOT3-210ENST00000618939 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
CNOT3-210ENST00000618939 ARF6P62330 175 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 ABHD17AQ96GS6 310 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 IGHG3P01860 377 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 ORM1P02763 201 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
CNOT3-210ENST00000618939 FCER1GP30273 86 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 LINC00205P59089 165 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 MUC15Q8N387 334 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 SNRNP40Q96DI7 357 aaKnown RBP11.53□□□□□ -0.56
CNOT3-210ENST00000618939 PCNX2A6NKB5 2137 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 CD99P14209 185 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 EFNB3Q15768 340 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 SLC25A15Q9Y619 301 aa11.53□□□□□ -0.56
CNOT3-210ENST00000618939 IGHV1-46P01743 117 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 FAM87AP0C7U9 286 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 UCNP55089 124 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 PAX9P55771 341 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 ECSCRQ19T08 205 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.56
CNOT3-210ENST00000618939 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 CBLN4Q9NTU7 201 aa11.52□□□□□ -0.56
CNOT3-210ENST00000618939 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.52□□□□□ -0.57
CNOT3-210ENST00000618939 TEX50A0A1B0GTY4 177 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
CNOT3-210ENST00000618939 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 PNKDQ8N490 385 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 GOSR1O95249 250 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 IGKV3-15P01624 115 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 SRSF6Q13247 344 aaKnown RBP11.52□□□□□ -0.57
CNOT3-210ENST00000618939 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
CNOT3-210ENST00000618939 NBEAP1P0C6P0 100 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 STAG3L2P0CL84 134 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 STAG3L3P0CL85 134 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 HIST3H2BBQ8N257 126 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 OR4A5Q8NH83 315 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 PGLYRP4Q96LB8 373 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
CNOT3-210ENST00000618939 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 LIPFP07098 398 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 RNASEH2CQ8TDP1 164 aaKnown RBP11.51□□□□□ -0.57
CNOT3-210ENST00000618939 HSPB8Q9UJY1 196 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 TRAV9-1A0A075B6T8 112 aa11.51□□□□□ -0.57
CNOT3-210ENST00000618939 FCGR2BP31994 310 aaPredicted RBP11.51□□□□□ -0.57
CNOT3-210ENST00000618939 MAS1LP35410 378 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
CNOT3-210ENST00000618939 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 HIST1H2BLQ99880 126 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 TRAV3A0A0B4J244 114 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 PEX7O00628 323 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 CD69Q07108 199 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
CNOT3-210ENST00000618939 FBXL15Q9H469 300 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms