RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 OR9G1Q8NH87 305 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
PTPN9-206ENST00000618819 ZNRF1Q8ND25 227 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 LOC105371242A0A075B767 164 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 PEBP1P30086 187 aaKnown RBP12.25□□□□□ -0.45
PTPN9-206ENST00000618819 PSMG4Q5JS54 123 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 HIST3H2BBQ8N257 126 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 IFI27L1Q96BM0 104 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 JPT2Q9H910 190 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FBXL7Q9UJT9 491 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 Q6AWC8 147 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 ADAMTSL5Q6ZMM2 481 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 CCL1P22362 96 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 SLC25A47Q6Q0C1 308 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 ITGB1BP1O14713 200 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 AMBPP02760 352 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 IGLV1-36A0A0B4J1U3 117 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 KIAA0100Q14667 2235 aaKnown RBP12.24□□□□□ -0.45
PTPN9-206ENST00000618819 TRAV14DV4A0A0A6YYC5 116 aa12.24□□□□□ -0.45
PTPN9-206ENST00000618819 KLF14Q8TD94 323 aaPredicted RBP12.24□□□□□ -0.45
PTPN9-206ENST00000618819 MDC1Q14676 2089 aaKnown RBP12.23□□□□□ -0.45
PTPN9-206ENST00000618819 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 RNF222A6NCQ9 220 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 NPIPB13A6NJU9 1138 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 NPIPB5A8MRT5 1133 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 NGFRP08138 427 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 PAX4O43316 350 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 CXCL1P09341 107 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 ZXDCQ2QGD7 858 aaPredicted RBP12.23□□□□□ -0.45
PTPN9-206ENST00000618819 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
PTPN9-206ENST00000618819 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 ZFP36L2P47974 494 aaKnown RBP12.23□□□□□ -0.45
PTPN9-206ENST00000618819 DEPPQ9NTK1 212 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 CD200R1LQ6Q8B3 271 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 UBE2V1Q13404 147 aa12.23□□□□□ -0.45
PTPN9-206ENST00000618819 PSG3Q16557 428 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 MPV17L2Q567V2 206 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 MYO5AQ9Y4I1 1855 aaKnown RBP12.22□□□□□ -0.45
PTPN9-206ENST00000618819 OR9G4Q8NGQ1 327 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 FAM214BQ7L5A3 538 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 PIMREGQ9BSJ6 248 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 ZNF638Q14966 1978 aaKnown RBP12.22□□□□□ -0.45
PTPN9-206ENST00000618819 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 INSP01308 110 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 PYYP10082 97 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 PTGDSP41222 190 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 SUMO4Q6EEV6 95 aa12.22□□□□□ -0.45
PTPN9-206ENST00000618819 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
PTPN9-206ENST00000618819 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 CHCHD1Q96BP2 118 aaKnown RBP12.21□□□□□ -0.45
PTPN9-206ENST00000618819 FOXD3Q9UJU5 478 aaPredicted RBP12.21□□□□□ -0.45
PTPN9-206ENST00000618819 PAX1P15863 534 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 LHX2P50458 406 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 PDLIM4P50479 330 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
PTPN9-206ENST00000618819 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.45
PTPN9-206ENST00000618819 FOXS1O43638 330 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 ZNF525Q8N782 197 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 OCC1Q8TAD7 63 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.45
PTPN9-206ENST00000618819 C1QL2Q7Z5L3 287 aa12.21□□□□□ -0.46
PTPN9-206ENST00000618819 MAFAQ8NHW3 353 aaPredicted RBP12.21□□□□□ -0.46
PTPN9-206ENST00000618819 TMEM238C9JI98 176 aa12.21□□□□□ -0.46
PTPN9-206ENST00000618819 IGHV3-11P01762 117 aa12.21□□□□□ -0.46
PTPN9-206ENST00000618819 CD55P08174 381 aa12.21□□□□□ -0.46
PTPN9-206ENST00000618819 PRSS53Q2L4Q9 553 aa12.21□□□□□ -0.46
PTPN9-206ENST00000618819 RGPD8O14715 1765 aaPredicted RBP12.21□□□□□ -0.46
PTPN9-206ENST00000618819 A0A0G2JMM0 328 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 A0A1W2PPB8 328 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 KIR3DP1A8MWS1 328 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 LCN12Q6JVE5 192 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 A0A1B0GUL6 1792 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 ORMDL2Q53FV1 153 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 C9JAW5 83 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 CCL20P78556 96 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 UNQ9370/PRO34162Q6UXP9 181 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 A0A1W2PQF6 199 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
PTPN9-206ENST00000618819 IGHV3-73A0A0B4J1V6 119 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 CXorf51AA0A1B0GTR3 108 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 BHLHA9Q7RTU4 235 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 SAXO1Q8IYX7 474 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
PTPN9-206ENST00000618819 C21orf62Q9NYP8 219 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms