RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 IFNA10P01566 189 aa14.18□□□□□ -0.14
CNOT3-209ENST00000617930 SAA1P0DJI8 122 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-209ENST00000617930 HSPE1P61604 102 aaKnown RBP14.18□□□□□ -0.14
CNOT3-209ENST00000617930 CYP2G1PQ6ZSU1 146 aa14.18□□□□□ -0.14
CNOT3-209ENST00000617930 RPUSD4Q96CM3 377 aaKnown RBP14.18□□□□□ -0.14
CNOT3-209ENST00000617930 NPCDR1Q9BY65 106 aa14.18□□□□□ -0.14
CNOT3-209ENST00000617930 ACTR3CQ9C0K3 210 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-209ENST00000617930 MANBALQ9NQG1 85 aa14.18□□□□□ -0.14
CNOT3-209ENST00000617930 FAM208BQ5VWN6 2430 aa14.18□□□□□ -0.14
CNOT3-209ENST00000617930 KBTBD11O94819 623 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 HRASP01112 189 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 DEFA4P12838 97 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 TMEM241Q24JQ0 296 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 PDZD11Q5EBL8 140 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 OR10X1Q8NGY0 326 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 FRZBQ92765 325 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 E7EUB6 86 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 C17orf112F2Z3M2 114 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 ZNF137PP52743 207 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 RTL8BQ17RB0 113 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 PYY3Q5JQD4 70 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 C16orf82Q7Z2V1 217 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 OR10D4PQ8NGN7 298 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 TMEM133Q9H2Q1 129 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 OR51B2Q9Y5P1 312 aa14.17□□□□□ -0.14
CNOT3-209ENST00000617930 FBN2P35556 2912 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 TRBV24-1A0A075B6N3 115 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 TRBV23-1A0A0A0MS06 115 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 HIST3H2BBQ8N257 126 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 OR4F5Q8NH21 305 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 OR9G1Q8NH87 305 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 OR4F4Q96R69 305 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 DMRT1Q9Y5R6 373 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 VPS13CQ709C8 3753 aa14.16□□□□□ -0.14
CNOT3-209ENST00000617930 TEX50A0A1B0GTY4 177 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TMEM250H0YL14 139 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 CD1BP29016 333 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 BSXQ3C1V8 233 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 FAM209BQ5JX69 171 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 GPR61Q9BZJ8 451 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 WDR83OSQ9Y284 106 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TNCP24821 2201 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 C22orf46C9J442 243 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 IGLV2-23P01705 113 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TMEM177Q53S58 311 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 GFI1BQ5VTD9 330 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TREML4Q6UXN2 200 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 NECAP1Q8NC96 275 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 ABHD5Q8WTS1 349 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 RAB1BQ9H0U4 201 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 PARLQ9H300 379 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 TENM4Q6N022 2769 aa14.15□□□□□ -0.14
CNOT3-209ENST00000617930 IGHV2-26A0A0B4J1V2 119 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 CA2P00918 260 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 IGLV1-47P01700 117 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 MRGPRG-AS1Q2M3A8 158 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 GCSAMLQ5JQS6 135 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 IGFBPL1Q8WX77 278 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 HARBI1Q96MB7 349 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 OR5B12Q96R08 314 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 BET1LQ9NYM9 111 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 RD3LP0DJH9 198 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 RPL23P62829 140 aaKnown RBP14.14□□□□□ -0.15
CNOT3-209ENST00000617930 ARSJQ5FYB0 599 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-209ENST00000617930 OR10W1Q8NGF6 305 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 OSR1Q8TAX0 266 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-209ENST00000617930 GATAD1Q8WUU5 269 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 RAB24Q969Q5 203 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 PFDN5Q99471 154 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 HINT2Q9BX68 163 aa14.14□□□□□ -0.15
CNOT3-209ENST00000617930 PPIAL4CA0A0B4J2A2 164 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 A1L4Q6 167 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 CGB1A6NKQ9 187 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 H7BYZ3 331 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 PPIAL4GP0DN37 164 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 CDC34P49427 236 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-209ENST00000617930 PRCDQ00LT1 54 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 ACOT6Q3I5F7 207 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-209ENST00000617930 LDLRAD2Q5SZI1 272 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 FAM71F2Q6NXP2 309 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 LY6G5BQ8NDX9 201 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 PRNDQ9UKY0 176 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 ZNF257Q9Y2Q1 563 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 CSMD2Q7Z408 3487 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 ARHGAP32A7KAX9 2087 aa14.13□□□□□ -0.15
CNOT3-209ENST00000617930 IGHV3-72A0A0B4J1Y9 119 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 FABP4P15090 132 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 GALR1P47211 349 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 SLC24A4Q8NFF2 622 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 C8orf46Q8TAG6 207 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 FLYWCH2Q96CP2 140 aaKnown RBP14.12□□□□□ -0.15
CNOT3-209ENST00000617930 MGST2Q99735 147 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 PAGE4O60829 102 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 LY86O95711 162 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 APOA2P02652 100 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 NPY1RP25929 384 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 NEIL1Q96FI4 390 aaPredicted RBP14.12□□□□□ -0.15
CNOT3-209ENST00000617930 SRD5A3Q9H8P0 318 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms