RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 IL6RP08887 468 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 ERHP84090 104 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 PSG5Q15238 335 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 TMEM177Q53S58 311 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 TMEM41BQ5BJD5 291 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SPATA31B1PQ5VZV4 182 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 DHRS7BQ6IAN0 325 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 UQCC3Q6UW78 93 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 BRD3OSQ6XYD6 125 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 PDPNQ86YL7 162 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SVBPQ8N300 66 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 LINC00311Q8N616 119 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 LYPD6BQ8NI32 183 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 ZNF596Q8TC21 504 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 C22orf15Q8WYQ4 148 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 ISOC2Q96AB3 205 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 C1orf159Q96HA4 380 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 PBDC1Q9BVG4 233 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 AURKAIP1Q9NWT8 199 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 MRPL36Q9P0J6 103 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 DPM3Q9P2X0 92 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 IGKV1OR2-108A0A075B7D4 117 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 IGHV4-30-2A0A087WSY4 118 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 A0A087X0M5 115 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 A0A1B0GX30 115 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 FOXH1O75593 365 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 TOX4O94842 621 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 IGHV2-5P01817 119 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 RNASE2P10153 161 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 ATF4P18848 351 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 USF1P22415 310 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 OR10J1P30954 320 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 MC5RP33032 325 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 KRTAP10-9P60411 292 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 LMO4P61968 165 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 ATP6V1FQ16864 119 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 TMEM30BQ3MIR4 351 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SOHLH1Q5JUK2 328 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 FAM120AOSQ5T036 256 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SP5Q6BEB4 398 aaPredicted RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 LY6G5BQ8NDX9 201 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 OR52E5Q8NH55 327 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 NPIPB3Q92617 1050 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 MARVELD3Q96A59 401 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 NPVFQ9HCQ7 196 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SEPSECSQ9HD40 501 aaKnown RBP2.76□□□□□ -1.97
LIG4-205ENST00000614526 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 WDR83OSQ9Y284 106 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 SIGLEC9Q9Y336 463 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 PXMP4Q9Y6I8 212 aa2.76□□□□□ -1.97
LIG4-205ENST00000614526 FAM90A9PA6NNJ1 464 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 ZNF727A8MUV8 499 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 PRSS46E5RG02 174 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 DNASE2O00115 360 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 PAGE4O60829 102 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 YIF1AO95070 293 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 SCAF4O95104 1147 aaKnown RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 VENTXO95231 258 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 PRTN3P24158 256 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 B2MP61769 119 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 SERF2P84101 59 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 GAMTQ14353 236 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 ICAM4Q14773 271 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 POU2AF1Q16633 256 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 TPTE2P1Q5T6R2 138 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 CST9LP1Q5W188 147 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 TEPPQ6URK8 271 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 PPP1R27Q86WC6 154 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 KIR3DL3Q8N743 410 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 STPG3Q8N7X2 389 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 OR5B3Q8NH48 314 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 TMEM167AQ8TBQ9 72 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 FAM168AQ92567 244 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 TNFRSF14Q92956 283 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 RPUSD4Q96CM3 377 aaKnown RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 P2RX4Q99571 388 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 PSMG3Q9BT73 122 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 GGTLC1Q9BX51 225 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 SEC11CQ9BY50 192 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 SLC35B3Q9H1N7 401 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 FNDC4Q9H6D8 234 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 FASNP49327 2511 aaKnown RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 C17orf112F2Z3M2 114 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 MOSP00540 346 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 ZNF90Q03938 601 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 PRSS8Q16651 343 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 MRGPRG-AS1Q2M3A8 158 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 AWAT1Q58HT5 328 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 FAM78BQ5VT40 261 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 CLRN3Q8NCR9 226 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 OR51G1Q8NGK1 321 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 VSTM2AQ8TAG5 236 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 EAF1Q96JC9 268 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 UHRF2Q96PU4 802 aa2.75□□□□□ -1.97
LIG4-205ENST00000614526 ACTR3CQ9C0K3 210 aaPredicted RBP2.75□□□□□ -1.97
LIG4-205ENST00000614526 FKBP11Q9NYL4 201 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms