RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 DBX1A6NMT0 343 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 FGF2P09038 288 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 GIG44P09565 113 aaPredicted RBP17.02■□□□□ 0.32
MMP28-203ENST00000612672 ARPC4P59998 168 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 LEMD1Q68G75 181 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 LILRB2Q8N423 598 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 ZBTB34Q8NCN2 500 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 OR10C1Q96KK4 312 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 ATP6V0BQ99437 205 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 KRTAP4-5Q9BYR2 181 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 PLEKHA2Q9HB19 425 aa17.02■□□□□ 0.32
MMP28-203ENST00000612672 LRP1BQ9NZR2 4599 aa17.02■□□□□ 0.31
MMP28-203ENST00000612672 CATR1Q13166 79 aa17.01■□□□□ 0.31
MMP28-203ENST00000612672 THOC7Q6I9Y2 204 aaKnown RBP17.01■□□□□ 0.31
MMP28-203ENST00000612672 OR1L8Q8NGR8 309 aa17.01■□□□□ 0.31
MMP28-203ENST00000612672 LSM10Q969L4 123 aaKnown RBP17.01■□□□□ 0.31
MMP28-203ENST00000612672 VCXQ9H320 206 aa17.01■□□□□ 0.31
MMP28-203ENST00000612672 MARCH11A6NNE9 402 aa17■□□□□ 0.31
MMP28-203ENST00000612672 NOTOA8MTQ0 251 aa17■□□□□ 0.31
MMP28-203ENST00000612672 NUPL2O15504 423 aaKnown RBP17■□□□□ 0.31
MMP28-203ENST00000612672 APOHP02749 345 aaPredicted RBP17■□□□□ 0.31
MMP28-203ENST00000612672 TMEM187Q14656 261 aa17■□□□□ 0.31
MMP28-203ENST00000612672 AADACL3Q5VUY0 350 aa17■□□□□ 0.31
MMP28-203ENST00000612672 Q6ZTC4 211 aa17■□□□□ 0.31
MMP28-203ENST00000612672 TMEM17Q86X19 198 aa17■□□□□ 0.31
MMP28-203ENST00000612672 HOGA1Q86XE5 327 aa17■□□□□ 0.31
MMP28-203ENST00000612672 SLC25A38Q96DW6 304 aa17■□□□□ 0.31
MMP28-203ENST00000612672 COMMD9Q9P000 198 aa17■□□□□ 0.31
MMP28-203ENST00000612672 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
MMP28-203ENST00000612672 IGHV4-28A0A0C4DH34 117 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 IGHV3-48P01763 117 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 MED14OSP0DP75 135 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 LINC00336Q6ZUF6 198 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 HSD17B13Q7Z5P4 300 aaPredicted RBP16.99■□□□□ 0.31
MMP28-203ENST00000612672 OR5H6Q8NGV6 325 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 ST8SIA2Q92186 375 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 RHBDL2Q9NX52 303 aa16.99■□□□□ 0.31
MMP28-203ENST00000612672 IGHV4-4A0A075B6R2 117 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 C15orf61A6NNL5 157 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 RTL8CO15255 209 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 CYB5BO43169 146 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 HLA-DMBP28068 263 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 DEFB131AP59861 70 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 TCF24Q7RTU0 167 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 HRH4Q9H3N8 390 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 OR51B2Q9Y5P1 312 aa16.98■□□□□ 0.31
MMP28-203ENST00000612672 I3L2K1 104 aa16.97■□□□□ 0.31
MMP28-203ENST00000612672 MRPS14O60783 128 aaKnown RBP16.97■□□□□ 0.31
MMP28-203ENST00000612672 YIF1AO95070 293 aa16.97■□□□□ 0.31
MMP28-203ENST00000612672 GNRHRP30968 328 aa16.97■□□□□ 0.31
MMP28-203ENST00000612672 DGCR14Q96DF8 476 aaKnown RBP16.97■□□□□ 0.31
MMP28-203ENST00000612672 SCRT1Q9BWW7 348 aa16.97■□□□□ 0.31
MMP28-203ENST00000612672 TXNL4BQ9NX01 149 aaKnown RBP16.97■□□□□ 0.31
MMP28-203ENST00000612672 TRAV18A0A075B6X5 111 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 ELOA3CA0A087WX78 387 aaPredicted RBP16.96■□□□□ 0.31
MMP28-203ENST00000612672 C11orf94C9JXX5 98 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 RLN1P04808 185 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 C4BPBP20851 252 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 G6PCP35575 357 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 CMC4P56277 68 aaPredicted RBP16.96■□□□□ 0.31
MMP28-203ENST00000612672 GIMAP1Q8WWP7 306 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 FCAMRQ8WWV6 532 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 NXF2Q9GZY0 626 aaKnown RBP16.96■□□□□ 0.31
MMP28-203ENST00000612672 MS4A6AQ9H2W1 248 aa16.96■□□□□ 0.31
MMP28-203ENST00000612672 RRP15Q9Y3B9 282 aaKnown RBP16.96■□□□□ 0.31
MMP28-203ENST00000612672 TRAV14DV4A0A0A6YYC5 116 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 IGHV3-66A0A0C4DH42 116 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 MEIS3P1A6NDR6 274 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 KRASP01116 189 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 RELQ04864 619 aaPredicted RBP16.95■□□□□ 0.3
MMP28-203ENST00000612672 SFXN4Q6P4A7 337 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 SLC25A46Q96AG3 418 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 CELA1Q9UNI1 258 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 X6R8D5 127 aa16.95■□□□□ 0.3
MMP28-203ENST00000612672 SCGNO76038 276 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 CLEC2LP0C7M8 214 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 LPAR6P43657 344 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 ERVK-16P61578 105 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 OR1P1Q8NH06 330 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 MISP3Q96FF7 219 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 VSIRQ9H7M9 311 aa16.94■□□□□ 0.3
MMP28-203ENST00000612672 APOBP04114 4563 aaKnown RBP16.93■□□□□ 0.3
MMP28-203ENST00000612672 PRSS29PA6NIE9 313 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 ANKRD65E5RJM6 399 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 DFFBO76075 338 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 F2RP25116 425 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 TOMM20LQ6UXN7 152 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 ZNF767PQ75MW2 155 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 ZFAND3Q9H8U3 227 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 TMEM14BQ9NUH8 114 aa16.93■□□□□ 0.3
MMP28-203ENST00000612672 TRAV10A0A0B4J240 114 aa16.92■□□□□ 0.3
MMP28-203ENST00000612672 PGLYRP1O75594 196 aaPredicted RBP16.92■□□□□ 0.3
MMP28-203ENST00000612672 MT-CO2P00403 227 aa16.92■□□□□ 0.3
MMP28-203ENST00000612672 FGF9P31371 208 aaPredicted RBP16.92■□□□□ 0.3
MMP28-203ENST00000612672 TRPT1Q86TN4 253 aaKnown RBP16.92■□□□□ 0.3
MMP28-203ENST00000612672 OR5AP2Q8NGF4 316 aa16.92■□□□□ 0.3
MMP28-203ENST00000612672 CMTM3Q96MX0 182 aa16.92■□□□□ 0.3
MMP28-203ENST00000612672 AUNIPQ9H7T9 357 aa16.92■□□□□ 0.3
MMP28-203ENST00000612672 ZNF705EA8MWA4 302 aaPredicted RBP16.91■□□□□ 0.3
MMP28-203ENST00000612672 M0R2N4 97 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms