RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TMEM182Q6ZP80 229 aaPredicted RBP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 DYNAPQ8N1N2 210 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 NPBQ8NG41 125 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 TMEM170AQ8WVE7 144 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 C17orf50Q8WW18 174 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 TAF15Q92804 592 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 MBD6Q96DN6 1003 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 PARP11Q9NR21 331 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 KIAA1456Q9P272 454 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 METTL1Q9UBP6 276 aaKnown RBP7.13□□□□□ -1.27
CCDC47-207ENST00000612558 TENM4Q6N022 2769 aa7.13□□□□□ -1.27
CCDC47-207ENST00000612558 A0A096LNT2 108 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 MFSD2BA6NFX1 497 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 CGB1A6NKQ9 187 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 NUDT19A8MXV4 375 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PRSS46E5RG02 174 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 E7EUB6 86 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 NBR2O15453 112 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 NDUFA3O95167 84 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PRH1P02810 166 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 SNRNP70P08621 437 aaKnown RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 BRS3P32247 399 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 SAA4P35542 130 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 SERF2P84101 59 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 HES1Q14469 280 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 MMDQ15546 238 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 TNXAQ16473 311 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 BSXQ3C1V8 233 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 AKR1C8PQ5T2L2 129 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PXDC1Q5TGL8 231 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 CENPVQ7Z7K6 275 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 OR10W1Q8NGF6 305 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 AJUBAQ96IF1 538 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 REG4Q9BYZ8 158 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 FBXL15Q9H469 300 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 TIMM9Q9Y5J7 89 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 NBPF19A0A087WUL8 3843 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 IGHV1-69DA0A0B4J2H0 117 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 IGHV1-69P01742 117 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 FAM106CPP0CH98 169 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 RNASE2P10153 161 aaKnown RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 MDKP21741 143 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 FGF7P21781 194 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 CD24P25063 80 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PAX6P26367 422 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 RPL27AP46776 148 aaKnown RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 CAMLGP49069 296 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 COMPP49747 757 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 HNF4GQ14541 408 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PLGLAQ15195 96 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 C10orf55Q5SWW7 151 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 PRSS57Q6UWY2 283 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 DPPA3Q6W0C5 159 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 Q6ZRG5 221 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 EIF4E3Q8N5X7 224 aaKnown RBP7.12□□□□□ -1.27
CCDC47-207ENST00000612558 LINC01356Q8N9X3 169 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 LYPD6BQ8NI32 183 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 MARC2Q969Z3 335 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 RSG1Q9BU20 258 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 HIF1ANQ9NWT6 349 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 FBXO7Q9Y3I1 522 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 RFNGQ9Y644 331 aa7.12□□□□□ -1.27
CCDC47-207ENST00000612558 MAP1AP78559 2803 aaPredicted RBP7.11□□□□□ -1.27
CCDC47-207ENST00000612558 NAV3Q8IVL0 2385 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 A0A1B0GW64 132 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 FNDC10F2Z333 226 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 C17orf112F2Z3M2 114 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 TEX46H3BTG2 121 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 MPDU1O75352 247 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 OR13C7P0DN81 318 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 FHITP49789 147 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 GNB1P62873 340 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 AANATQ16613 207 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 C5orf64Q2M2E5 130 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 Q5PR19 223 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 CDPF1Q6NVV7 123 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 Q8N6K4 173 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
CCDC47-207ENST00000612558 HRH4Q9H3N8 390 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 NPVFQ9HCQ7 196 aa7.11□□□□□ -1.27
CCDC47-207ENST00000612558 TRAV40A0A0B4J280 105 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 SMCO3A2RU48 225 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 FCN1O00602 326 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 CNIH1O95406 144 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 TMEM11P17152 192 aa7.1□□□□□ -1.27
CCDC47-207ENST00000612558 ZNF616Q08AN1 781 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms