RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 CEBPZOSA8MTT3 80 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 E7EUB6 86 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 WRBO00258 174 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 GOSR2O14653 212 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 TSC22D2O75157 780 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 GIPP09681 153 aaPredicted RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 MDKP21741 143 aaPredicted RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 CDX1P47902 265 aaPredicted RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 CD83Q01151 205 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 WT1-ASQ06250 92 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 IZUMO4Q1ZYL8 232 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 AWAT1Q58HT5 328 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 C10orf55Q5SWW7 151 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 VN1R17PQ8TDU5 208 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 ZNF747Q9BV97 191 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 GAR1Q9NY12 217 aaKnown RBP9.62□□□□□ -0.87
TGFB1-204ENST00000600196 GSKIPQ9P0R6 139 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
TGFB1-204ENST00000600196 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 FAM25EA8MYX2 175 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 G3V318 75 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 DEFA4P12838 97 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 HOXA1P49639 335 aaPredicted RBP9.61□□□□□ -0.87
TGFB1-204ENST00000600196 RAB9AP51151 201 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 H2BFSP57053 126 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 RAP2BP61225 183 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 EXOSC2Q13868 293 aaKnown RBP9.61□□□□□ -0.87
TGFB1-204ENST00000600196 ECSCRQ19T08 205 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 CACNG8Q8WXS5 425 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 CXorf58Q96LI9 332 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 NOL4LQ96MY1 436 aaPredicted RBP9.61□□□□□ -0.87
TGFB1-204ENST00000600196 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
TGFB1-204ENST00000600196 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 ZNF436Q9C0F3 470 aaPredicted RBP9.61□□□□□ -0.87
TGFB1-204ENST00000600196 RBKSQ9H477 322 aa9.61□□□□□ -0.87
TGFB1-204ENST00000600196 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 MBPP02686 304 aaPredicted RBP9.6□□□□□ -0.87
TGFB1-204ENST00000600196 AREGP15514 252 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 FCGR2BP31994 310 aaPredicted RBP9.6□□□□□ -0.87
TGFB1-204ENST00000600196 RAB11AP62491 216 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 RPL23AP62750 156 aaKnown RBP9.6□□□□□ -0.87
TGFB1-204ENST00000600196 RUNX1Q01196 453 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 C2orf68Q2NKX9 166 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 SLC24A4Q8NFF2 622 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 P2RX4Q99571 388 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 TXN2Q99757 166 aa9.6□□□□□ -0.87
TGFB1-204ENST00000600196 RPS10-NUDT3A0A1W2PQS6 291 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 E5RGE8 158 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 K7EPK0 472 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 CCSO14618 274 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 SOX15O60248 233 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
TGFB1-204ENST00000600196 MYOD1P15172 320 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 GPX4P36969 197 aaPredicted RBP9.59□□□□□ -0.87
TGFB1-204ENST00000600196 FCN2Q15485 313 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 C12orf54Q6X4T0 127 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 OR5T1Q8NG75 326 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 OR11H7Q8NGC8 314 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 CITED1Q99966 193 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 GGACTQ9BVM4 153 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 STRAPQ9Y3F4 350 aaKnown RBP9.59□□□□□ -0.87
TGFB1-204ENST00000600196 TSSC4Q9Y5U2 329 aaPredicted RBP9.59□□□□□ -0.87
TGFB1-204ENST00000600196 ZFHX3Q15911 3703 aa9.59□□□□□ -0.87
TGFB1-204ENST00000600196 TRBV7-1A0A0A6YYK4 115 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 FNDC10F2Z333 226 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 L7N2F9 121 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 DEDDO75618 318 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 IFNA10P01566 189 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 PF4V1P10720 104 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 SLC25A4P12235 298 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 LYL1P12980 280 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 NPY1RP25929 384 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 P2RY1P47900 373 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
TGFB1-204ENST00000600196 VAMP2P63027 116 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 KIAA0141Q14154 515 aaPredicted RBP9.58□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM95Q3KNT9 176 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 SLC25A24Q6NUK1 477 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 ZNF329Q86UD4 541 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 ZNF491Q8N8L2 437 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 PPP1R1CQ8WVI7 109 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 LINC00527Q9UJ94 153 aa9.58□□□□□ -0.88
TGFB1-204ENST00000600196 SCGB2A1O75556 95 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 MPC2O95563 127 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 TRGV3P03979 118 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 CXCL3P19876 107 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 RAB32Q13637 225 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 ZNF343Q6P1L6 599 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 PRSS54Q6PEW0 395 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM14EPQ6UXP3 125 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 SLC25A31Q9H0C2 315 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms