RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TATDN3Q17R31 274 aa17.22■□□□□ 0.35
CHMP2A-204ENST00000597848 OR2C3Q8N628 320 aa17.22■□□□□ 0.35
CHMP2A-204ENST00000597848 ZNF491Q8N8L2 437 aa17.22■□□□□ 0.35
CHMP2A-204ENST00000597848 TET2Q6N021 2002 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 C5orf51A6NDU8 294 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 CYB5BO43169 146 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 PITX3O75364 302 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 BRI3O95415 125 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 SNCAP37840 140 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 CDX1P47902 265 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 RHOGP84095 191 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 DEFA5Q01523 94 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 KIAA0141Q14154 515 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 IAH1Q2TAA2 248 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 SLC25A24Q6NUK1 477 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 KLHL30-AS1Q8NEE0 82 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 OR10C1Q96KK4 312 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 HEYLQ9NQ87 328 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 HSPB7Q9UBY9 170 aa17.21■□□□□ 0.35
CHMP2A-204ENST00000597848 SSNA1O43805 119 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 OR2J3O76001 311 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 HIST1H1BP16401 226 aaKnown RBP17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 OXA1LQ15070 435 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 PDLIM3Q53GG5 364 aaPredicted RBP17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 C18orf65Q6ZTR6 163 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 MYOZ3Q8TDC0 251 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 UBE2E2Q96LR5 201 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 OR5B12Q96R08 314 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 RBKSQ9H477 322 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 FBXL7Q9UJT9 491 aa17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 F11RQ9Y624 299 aaKnown RBP17.2■□□□□ 0.34
CHMP2A-204ENST00000597848 A0A0G2JLM5 398 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 ADARB2-AS1A8MUL3 147 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 IGHV3-11P01762 117 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 ATP5G2Q06055 141 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 NECAP1Q8NC96 275 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 USMG5Q96IX5 58 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 FANCD2OSQ96PS1 177 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 HIPK2Q9H2X6 1198 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 GNB4Q9HAV0 340 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 ALG5Q9Y673 324 aa17.19■□□□□ 0.34
CHMP2A-204ENST00000597848 TRBV9A0A0B4J1U6 114 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 FAM223BA6NKX1 122 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 FAM90A26D6RGX4 464 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 INS-IGF2F8WCM5 200 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 M0QZ24 198 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 MED6O75586 246 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 SUB1P53999 127 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 C2orf68Q2NKX9 166 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 GSG1LQ6UXU4 331 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 FAM223AQ8IWN6 122 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 ZBTB8BQ8NAP8 495 aaPredicted RBP17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 OR1L6Q8NGR2 347 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 DTD1Q8TEA8 209 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 P2RX4Q99571 388 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 MAGT1Q9H0U3 335 aa17.18■□□□□ 0.34
CHMP2A-204ENST00000597848 IGLV11-55A0A075B6I3 123 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 C7orf66A4D0T2 115 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 GOSR2O14653 212 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 NDUFB8O95169 186 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 SCGB1D2O95969 90 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 NKX2-1P43699 371 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 C8orf86Q6ZUL3 223 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 OR1P1Q8NH06 330 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 THYN1Q9P016 225 aa17.17■□□□□ 0.34
CHMP2A-204ENST00000597848 WRBO00258 174 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 MFAP2P55001 183 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 C15orf32Q32M92 178 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 ZNF114Q8NC26 417 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 OR4D5Q8NGN0 318 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 C4orf3Q8WVX3 66 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 C2orf50Q96LR7 162 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 DMRT1Q9Y5R6 373 aa17.16■□□□□ 0.34
CHMP2A-204ENST00000597848 SYNGR2O43760 224 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 IAPPP10997 89 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 HTR2BP41595 481 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 ID3Q02535 119 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 C11orf87Q6NUJ2 197 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 OR4F17Q8NGA8 305 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 MISP3Q96FF7 219 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 OR4F4Q96R69 305 aa17.15■□□□□ 0.34
CHMP2A-204ENST00000597848 SIX6O95475 246 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 IFNA10P01566 189 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 LGALS1P09382 135 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 RNASE2P10153 161 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 EXOSC2Q13868 293 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 KLK9Q2XQG4 91 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 SLC24A4Q8NFF2 622 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 KLK9Q9UKQ9 250 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 S4R3C0 116 aa17.14■□□□□ 0.33
CHMP2A-204ENST00000597848 POLR2GP62487 172 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHMP2A-204ENST00000597848 DEFB136Q30KP8 78 aa17.13■□□□□ 0.33
CHMP2A-204ENST00000597848 DUX3Q96PT4 197 aa17.13■□□□□ 0.33
CHMP2A-204ENST00000597848 IGHV3-21A0A0B4J1V1 117 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 ANKRD34BA5PLL1 514 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 I3L521 148 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 TSPAN15O95858 294 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 IGHV3-23P01764 117 aa17.12■□□□□ 0.33
CHMP2A-204ENST00000597848 EEF1AKMT3Q96AZ1 226 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms