RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 HSPB7Q9UBY9 170 aa8.42□□□□□ -1.06
SMAD4-214ENST00000592186 NF1P21359 2839 aa8.42□□□□□ -1.06
SMAD4-214ENST00000592186 TRAV41A0A0B4J266 112 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 SH2D7A6NKC9 451 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 LINC01548A6NM66 108 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 GOSR2O14653 212 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 ATP6V0E1O15342 81 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 CYB5BO43169 146 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 NKX2-1P43699 371 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 SSBP2P81877 361 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 ERHP84090 104 aaKnown RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 PRCDQ00LT1 54 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 ID3Q02535 119 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 TNFRSF9Q07011 255 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 FCN2Q15485 313 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 Q6ZS46 218 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 CENPVQ7Z7K6 275 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-214ENST00000592186 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 LINC01006Q8NI28 216 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 SCARB1Q8WTV0 552 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 TMEM158Q8WZ71 300 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 OR10C1Q96KK4 312 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 HINT2Q9BX68 163 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 NMES1Q9C002 83 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 HIPK2Q9H2X6 1198 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 SERTAD4Q9NUC0 356 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 MGAT4CQ9UBM8 478 aa8.41□□□□□ -1.06
SMAD4-214ENST00000592186 TMEM89A2RUT3 159 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 CLPSL1A2RUU4 121 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 CEBPZOSA8MTT3 80 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 WRBO00258 174 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 BRI3O95415 125 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 MPC2O95563 127 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 OPN1MWP04001 364 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 OPN1MW2P0DN77 364 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 OPN1MW3P0DN78 364 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 SNCAP37840 140 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMAD4-214ENST00000592186 SRSF4Q08170 494 aaKnown RBP8.4□□□□□ -1.06
SMAD4-214ENST00000592186 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-214ENST00000592186 UNQ5815/PRO19632Q6UWF5 114 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 LFNGQ8NES3 379 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 CIB3Q96Q77 187 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-214ENST00000592186 PLEKHA3Q9HB20 300 aa8.4□□□□□ -1.06
SMAD4-214ENST00000592186 NPIPB5A8MRT5 1133 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 TEX22C9J3V5 150 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 CCSO14618 274 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 SYNGR2O43760 224 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 RLN2P04090 185 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 CRYGCP07315 174 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 PSMB6P28072 239 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 RPP30P78346 268 aaKnown RBP8.39□□□□□ -1.07
SMAD4-214ENST00000592186 C2orf68Q2NKX9 166 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 LGALSLQ3ZCW2 172 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-214ENST00000592186 C10orf55Q5SWW7 151 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 TEX38Q6PEX7 206 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 OR4D5Q8NGN0 318 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 FAM103A1Q9BTL3 118 aaKnown RBP8.39□□□□□ -1.07
SMAD4-214ENST00000592186 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-214ENST00000592186 HEYLQ9NQ87 328 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-214ENST00000592186 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 WSB1Q9Y6I7 421 aa8.39□□□□□ -1.07
SMAD4-214ENST00000592186 IGLC7A0M8Q6 106 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 PSMB11A5LHX3 300 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 CGB1A6NKQ9 187 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 E7EUB6 86 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 SMLR1H3BR10 107 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 H3BUA1 57 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 DNASE2O00115 360 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 IGHG4P01861 327 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 NMBP08949 121 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 DEFA4P12838 97 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 MYOD1P15172 320 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 HIST1H1BP16401 226 aaKnown RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 PVALBP20472 110 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 PPIFP30405 207 aaKnown RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 H2BFSP57053 126 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 RIPPLY3P57055 190 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 NDPQ00604 133 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 SRSF2Q01130 221 aaKnown RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 IL15RAQ13261 267 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OPCMLQ14982 345 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 UQCC3Q6UW78 93 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OR5T1Q8NG75 326 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OR11H7Q8NGC8 314 aa8.38□□□□□ -1.07
SMAD4-214ENST00000592186 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms