RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 ZNF439Q8NDP4 499 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 NOSIPQ9Y314 301 aaKnown RBP0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 KIF13AQ9H1H9 1805 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 HERC1Q15751 4861 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 IGKV2-40A0A087WW87 121 aaPredicted RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 IGKV1D-43A0A0B4J1Z2 117 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 EEF1E1-BLOC1S5C9J1V9 151 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 MRPS14O60783 128 aaKnown RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 DCTN3O75935 186 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 IGKV2D-40P01614 121 aaPredicted RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 KRT7P08729 469 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 FXYD2P54710 66 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 ZNF345Q14585 488 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 LPCAT4Q643R3 524 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 C8orf74Q6P047 294 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 RPS19BP1Q86WX3 136 aaKnown RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 DHFR2Q86XF0 187 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 Q8N2B8 174 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 OPTNQ96CV9 577 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 LSM5Q9Y4Y9 91 aaKnown RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 C9orf84Q5VXU9 1444 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 TONSLQ96HA7 1378 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 BSNQ9UPA5 3926 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 TMEM212A6NML5 194 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 SDCBPO00560 298 aaPredicted RBP0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 IFNA5P01569 189 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 TNNC2P02585 160 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 AADACL3Q5VUY0 350 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 SYPL2Q5VXT5 272 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 TMEM86BQ8N661 226 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 DERL1Q9BUN8 251 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 ROS1P08922 2347 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 RYR2Q92736 4967 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 DCCP43146 1447 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 SETD5Q9C0A6 1442 aa0.63□□□□□ -2.31
RPRD1A-210ENST00000591994 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 CEP164Q9UPV0 1460 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 IGKV3-7A0A075B6H7 116 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 IRGMA1A4Y4 181 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 KCNK1O00180 336 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 NFYAP23511 347 aaPredicted RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 DEFA1P59665 94 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 CCL20P78556 96 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 RUNX1Q01196 453 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 NDUFA5Q16718 116 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 IBA57Q5T440 356 aaKnown RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 LCN15Q6UWW0 184 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 BPIFA4PQ86YQ2 179 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 SLC35B4Q969S0 331 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 MRPS26Q9BYN8 205 aaKnown RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 WDR61Q9GZS3 305 aaKnown RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 SIPA1L1O43166 1804 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 RAPGEF6Q8TEU7 1601 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 LAMB2P55268 1798 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 ABCA2Q9BZC7 2435 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 TTC21AQ8NDW8 1320 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 MICAL3Q7RTP6 2002 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H1EP10412 219 aaKnown RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 DCXRQ7Z4W1 244 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 TMEM106AQ96A25 262 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 REG4Q9BYZ8 158 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 YIPF3Q9GZM5 350 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 TP73-AS1Q9UF72 201 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 GUCA1BQ9UMX6 200 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 PKIGQ9Y2B9 76 aa0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 V9GYY5 206 aaPredicted RBP0.62□□□□□ -2.31
RPRD1A-210ENST00000591994 A0A1B0GV50 99 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 CLPSP04118 112 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 METTL15P1P0C7V9 234 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 G6PCP35575 357 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 ZNF80P51504 273 aaPredicted RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 SPCS3P61009 180 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 MAGOHP61326 146 aaKnown RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 IFITM2Q01629 132 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 ZNF846Q147U1 533 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 Q6ZS49 121 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 WFDC11Q8NEX6 87 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 C11orf40Q8WZ69 217 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 PPP1R2P1Q96PQ5 205 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 PPRC1Q5VV67 1664 aaKnown RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 OR5G3P0C626 314 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BOP23527 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BBP33778 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BDP58876 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BCP62807 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HBA1P69905 142 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 CTAG1AP78358 180 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST2H2BEQ16778 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 AAED1Q7RTV5 226 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 MRPL30Q8TCC3 161 aaKnown RBP0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BHQ93079 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BNQ99877 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST1H2BMQ99879 126 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 MED9Q9NWA0 146 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 CACNA1BQ00975 2339 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 PCDH15Q96QU1 1955 aa0.61□□□□□ -2.31
RPRD1A-210ENST00000591994 GREB1Q4ZG55 1949 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms