RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 PEX16Q9Y5Y5 336 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TNCP24821 2201 aa2.91□□□□□ -1.94
VMP1-205ENST00000587470 TENM3Q9P273 2699 aa2.9□□□□□ -1.94
VMP1-205ENST00000587470 MEIKINA0A087WXM9 373 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 TRGV10A0A0A0MS01 117 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 TRBV6-6A0A0A6YYG2 114 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 IGHV2-26A0A0B4J1V2 119 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 A0A1W2PRD5 423 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 A0A1W2PRF3 423 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 A0A1W2PRM7 423 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 TMEM30CPA0ZSE6 113 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 FUOMA2VDF0 154 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF729A6NN14 1252 aaPredicted RBP2.9□□□□□ -1.95
VMP1-205ENST00000587470 C12orf77C9JDV5 145 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 MCRIP1C9JLW8 97 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 LY6LH3BQJ8 138 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 CLDN34H7C241 214 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 MFNGO00587 321 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 NPFFO15130 113 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ORC5O43913 435 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 CA11O75493 328 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 GABARAPO95166 117 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 GZMHP20718 246 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 OMGP23515 440 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 MYL9P24844 172 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 CDK2P24941 298 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 PAX6P26367 422 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 SSTR5P35346 364 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 RPL5P46777 297 aaKnown RBP2.9□□□□□ -1.95
VMP1-205ENST00000587470 P2RY1P47900 373 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 VBP1P61758 197 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 LSM3P62310 102 aaKnown RBP2.9□□□□□ -1.95
VMP1-205ENST00000587470 MXD1Q05195 221 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 FGL1Q08830 312 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 PRAMEF5Q5TYX0 476 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 GPR157Q5UAW9 335 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 GPR107Q5VW38 600 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 SFXN4Q6P4A7 337 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF600Q6ZNG1 722 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 PDZD9Q8IXQ8 264 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 SIGLECL1Q8N7X8 197 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF565Q8N9K5 539 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 OR4P4Q8NGL7 312 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 OR5H6Q8NGV6 325 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 OR4K15Q8NH41 348 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF596Q8TC21 504 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 MRPL30Q8TCC3 161 aaKnown RBP2.9□□□□□ -1.95
VMP1-205ENST00000587470 SLC25A46Q96AG3 418 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 SLC25A38Q96DW6 304 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ARHGAP5-AS1Q96IT6 56 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF714Q96N38 554 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 S100A13Q99584 98 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 HDHD3Q9BSH5 251 aaPredicted RBP2.9□□□□□ -1.95
VMP1-205ENST00000587470 PECRQ9BY49 303 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 CST11Q9H112 138 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 PLGRKTQ9HBL7 147 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF286AQ9HBT8 521 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 VCX3AQ9NNX9 186 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 CALYQ9NYX4 217 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNRD1Q9P1U0 126 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 MLXQ9UH92 298 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 ZNF221Q9UK13 617 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 PSG11Q9UQ72 335 aa2.9□□□□□ -1.95
VMP1-205ENST00000587470 TRAV9-2A0A087WT02 112 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 IGKV1-6A0A0C4DH72 117 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 VGLL3A8MV65 326 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 C3orf84H3BNL1 204 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 NBR2O15453 112 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 CLPXO76031 633 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 SCGNO76038 276 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 HBZP02008 142 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 SCTP09683 121 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 HIST1H1DP16402 221 aaKnown RBP2.89□□□□□ -1.95
VMP1-205ENST00000587470 COX7A1P24310 79 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 GLP1RP43220 463 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 RANBP1P43487 201 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 UBA52P62987 128 aaKnown RBP2.89□□□□□ -1.95
VMP1-205ENST00000587470 DYNC1I2Q13409 638 aaKnown RBP2.89□□□□□ -1.95
VMP1-205ENST00000587470 SPCS2Q15005 226 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 SLC9A3R2Q15599 337 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 HMGN3Q15651 99 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 CDNFQ49AH0 187 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 CT45A1Q5HYN5 189 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 IDNKQ5T6J7 187 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 MINOS1Q5TGZ0 78 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 LINC00311Q8N616 119 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 C8orf31Q8N9H6 132 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 ZNF439Q8NDP4 499 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 BEST4Q8NFU0 473 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 OR10A7Q8NGE5 316 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 OR13D1Q8NGV5 346 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 OR10R2Q8NGX6 335 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 CT45A3Q8NHU0 189 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 UBALD1Q8TB05 177 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 NDNFQ8TB73 568 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 LGALS14Q8TCE9 139 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 LEAP2Q969E1 77 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 ARL11Q969Q4 196 aa2.89□□□□□ -1.95
VMP1-205ENST00000587470 RAB3CQ96E17 227 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms