RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
SRSF1-208ENST00000584773 FAM212BQ9NTI7 297 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-208ENST00000584773 TECRQ9NZ01 308 aaKnown RBP13.54□□□□□ -0.24
SRSF1-208ENST00000584773 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
SRSF1-208ENST00000584773 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
SRSF1-208ENST00000584773 TPPPO94811 219 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 CD74P04233 296 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
SRSF1-208ENST00000584773 RND3P61587 244 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 SP6Q3SY56 376 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 SCGB2B2Q4G0G5 96 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 ARRDC1Q8N5I2 433 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 TMEM229BQ8NBD8 167 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 OR4A16Q8NH70 328 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 ZNF414Q96IQ9 312 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-208ENST00000584773 SRD5A3Q9H8P0 318 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 SLC2A8Q9NY64 477 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
SRSF1-208ENST00000584773 C3orf84H3BNL1 204 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.25
SRSF1-208ENST00000584773 RAB3DO95716 219 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 IGHV3-48P01763 117 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 ADMP35318 185 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 STEAP1BQ6NZ63 245 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 LINC00322Q6ZN03 302 aaPredicted RBP13.52□□□□□ -0.25
SRSF1-208ENST00000584773 OR13C8Q8NGS7 320 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 MARCH1Q8TCQ1 289 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 DYNC2LI1Q8TCX1 351 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 TMEM190Q8WZ59 177 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 MISP3Q96FF7 219 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 FAM110AQ9BQ89 295 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 FKBP11Q9NYL4 201 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 CEPT1Q9Y6K0 416 aa13.52□□□□□ -0.25
SRSF1-208ENST00000584773 OR11H12B2RN74 326 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 GABARAPH6UMI1 98 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 CYB5BO43169 146 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 TAS2R19P59542 299 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 Q56UQ5 140 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 OR2C3Q8N628 320 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 CITED4Q96RK1 184 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 SPATA25Q9BR10 227 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 EDA2RQ9HAV5 297 aa13.51□□□□□ -0.25
SRSF1-208ENST00000584773 CSMD3Q7Z407 3707 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 A0A0G2JRQ6 117 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 C3orf85A0A1B0GTC6 90 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 P0C879 139 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 C8orf88P0DMB2 117 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 TBPP20226 339 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 CASC10Q5T4H9 136 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 OR1P1Q8NH06 330 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 TERB2Q8NHR7 220 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 RAB2BQ8WUD1 216 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-208ENST00000584773 ZNF486Q96H40 463 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-208ENST00000584773 PALMDQ9NP74 551 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 RYR2Q92736 4967 aa13.5□□□□□ -0.25
SRSF1-208ENST00000584773 A0A0B4J293 547 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 I3L2K1 104 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 AKR1C2P52895 323 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 HSPE1P61604 102 aaKnown RBP13.49□□□□□ -0.25
SRSF1-208ENST00000584773 IL18Q14116 193 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 SMIM4Q8WVI0 70 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 DIRAS2Q96HU8 199 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 C20orf24Q9BUV8 137 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
SRSF1-208ENST00000584773 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
SRSF1-208ENST00000584773 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
SRSF1-208ENST00000584773 TRIM16LQ309B1 348 aa13.48□□□□□ -0.25
SRSF1-208ENST00000584773 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
SRSF1-208ENST00000584773 OR4C16Q8NGL9 310 aa13.48□□□□□ -0.25
SRSF1-208ENST00000584773 C15orf40Q8WUR7 153 aa13.48□□□□□ -0.25
SRSF1-208ENST00000584773 PINX1Q96BK5 328 aaKnown RBP13.48□□□□□ -0.25
SRSF1-208ENST00000584773 C6orf62Q9GZU0 229 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-208ENST00000584773 HIPK2Q9H2X6 1198 aa13.48□□□□□ -0.25
SRSF1-208ENST00000584773 GAR1Q9NY12 217 aaKnown RBP13.48□□□□□ -0.25
SRSF1-208ENST00000584773 H3BMQ9 156 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 ST8SIA3O43173 380 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 MT-CO2P00403 227 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-208ENST00000584773 CTSGP08311 255 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 TMBIM6P55061 237 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 ELLP55199 621 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-208ENST00000584773 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 ZFAND1Q8TCF1 268 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 MARC2Q969Z3 335 aa13.47□□□□□ -0.25
SRSF1-208ENST00000584773 RTBDNQ9BSG5 229 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-208ENST00000584773 NDUFA4O00483 81 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms