RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 COTL1Q14019 142 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 TMEM187Q14656 261 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 TCTEX1D4Q5JR98 221 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SLC25A42Q86VD7 318 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 C12orf45Q8N5I9 185 aaPredicted RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 ADAD2Q8NCV1 583 aaKnown RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 OR5M8Q8NGP6 311 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SRSF12Q8WXF0 261 aaKnown RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 NOL4LQ96MY1 436 aaPredicted RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 LINC00052Q96N35 136 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 CLCC1Q96S66 551 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SPIN2AQ99865 258 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SPIN2BQ9BPZ2 258 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 SRSF8Q9BRL6 282 aaKnown RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 MARVELD1Q9BSK0 173 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 ALX4Q9H161 411 aaPredicted RBP7.74□□□□□ -1.17
GGA3-209ENST00000580646 MED28Q9H204 178 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 FKBP11Q9NYL4 201 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 FBXO7Q9Y3I1 522 aa7.74□□□□□ -1.17
GGA3-209ENST00000580646 FAM240BA0A1B0GVZ2 78 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
GGA3-209ENST00000580646 KRASP01116 189 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 AKR1C4P17516 323 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 HLA-GP17693 338 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 PSMB8P28062 276 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 G6PCP35575 357 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 MECP2P51608 486 aaKnown RBP7.73□□□□□ -1.17
GGA3-209ENST00000580646 TNXAQ16473 311 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 BEAN1Q3B7T3 259 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 SAMD5Q5TGI4 173 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 C10orf99Q6UWK7 81 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 SSX9Q7RTT3 188 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 H2BFWTQ7Z2G1 175 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 ZNF429Q86V71 674 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 LRTM2Q8N967 370 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 OR5B3Q8NH48 314 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 MYOZ3Q8TDC0 251 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 LSM10Q969L4 123 aaKnown RBP7.73□□□□□ -1.17
GGA3-209ENST00000580646 ZFP57Q9NU63 452 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 TMEM14BQ9NUH8 114 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
GGA3-209ENST00000580646 DMRT1Q9Y5R6 373 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 TSSC4Q9Y5U2 329 aaPredicted RBP7.73□□□□□ -1.17
GGA3-209ENST00000580646 NOTCH3Q9UM47 2321 aa7.73□□□□□ -1.17
GGA3-209ENST00000580646 A0A0B4J2A0 478 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 C15orf61A6NNL5 157 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 G3V318 75 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 SFT2D2O95562 160 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 IGKV1-5P01602 117 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 TCRBP04435 133 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 RPL27AP46776 148 aaKnown RBP7.72□□□□□ -1.17
GGA3-209ENST00000580646 AKR1C2P52895 323 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 TAS2R60P59551 318 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 RAB5BP61020 215 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 GNB1P62873 340 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 KLK9Q2XQG4 91 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 SP6Q3SY56 376 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 CXorf66Q5JRM2 361 aaPredicted RBP7.72□□□□□ -1.17
GGA3-209ENST00000580646 KPRPQ5T749 579 aaPredicted RBP7.72□□□□□ -1.17
GGA3-209ENST00000580646 UNQ5815/PRO19632Q6UWF5 114 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 TMED4Q7Z7H5 227 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 ZNF695Q8IW36 515 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 SELENOHQ8IZQ5 122 aaKnown RBP7.72□□□□□ -1.17
GGA3-209ENST00000580646 LGI3Q8N145 548 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 LFNGQ8NES3 379 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 FAM103A1Q9BTL3 118 aaKnown RBP7.72□□□□□ -1.17
GGA3-209ENST00000580646 COMMD5Q9GZQ3 224 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 C20orf85Q9H1P6 137 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 SHPKQ9UHJ6 478 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 KLK9Q9UKQ9 250 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 ZNF257Q9Y2Q1 563 aa7.72□□□□□ -1.17
GGA3-209ENST00000580646 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 A0A0B4J293 547 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 A0A1W2PN81 502 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 MSGN1A6NI15 193 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 NPIPB5A8MRT5 1133 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 TEX22C9J3V5 150 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 NDUFS6O75380 124 aaKnown RBP7.71□□□□□ -1.18
GGA3-209ENST00000580646 IFNA10P01566 189 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 CRYGCP07315 174 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 OR4E1P0C645 316 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 OR9G9P0C7N8 305 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 PF4V1P10720 104 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 PVALBP20472 110 aaPredicted RBP7.71□□□□□ -1.18
GGA3-209ENST00000580646 CHRNA7P36544 502 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 CDX1P47902 265 aaPredicted RBP7.71□□□□□ -1.18
GGA3-209ENST00000580646 OR2B8PP59922 312 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 PPP1R1AQ13522 171 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 ECSCRQ19T08 205 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 ASPHD1Q5U4P2 390 aa7.71□□□□□ -1.18
GGA3-209ENST00000580646 TMEM268Q5VZI3 342 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms