RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 PITX3O75364 302 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 C10orf99Q6UWK7 81 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
CLN6-208ENST00000567060 OR5T1Q8NG75 326 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 PRR13Q9NZ81 148 aa13.02□□□□□ -0.33
CLN6-208ENST00000567060 MED6O75586 246 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 HOXB5P09067 269 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 OR13C7P0DN81 318 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 MYOD1P15172 320 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
CLN6-208ENST00000567060 IZUMO4Q1ZYL8 232 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 OR2C3Q8N628 320 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 NECAP1Q8NC96 275 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 OR4F17Q8NGA8 305 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 OR4F4Q96R69 305 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 ZNF355PQ9NSJ1 428 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 HSPB7Q9UBY9 170 aa13.01□□□□□ -0.33
CLN6-208ENST00000567060 TSPAN15O95858 294 aa13□□□□□ -0.33
CLN6-208ENST00000567060 TRGV3P03979 118 aa13□□□□□ -0.33
CLN6-208ENST00000567060 RPLP1P05386 114 aaKnown RBP13□□□□□ -0.33
CLN6-208ENST00000567060 DEFA4P12838 97 aa13□□□□□ -0.33
CLN6-208ENST00000567060 AREGP15514 252 aa13□□□□□ -0.33
CLN6-208ENST00000567060 SUB1P53999 127 aaKnown RBP eCLIP13□□□□□ -0.33
CLN6-208ENST00000567060 TPPP2P59282 170 aa13□□□□□ -0.33
CLN6-208ENST00000567060 RUNX1Q01196 453 aa13□□□□□ -0.33
CLN6-208ENST00000567060 WT1-ASQ06250 92 aa13□□□□□ -0.33
CLN6-208ENST00000567060 TNFRSF9Q07011 255 aa13□□□□□ -0.33
CLN6-208ENST00000567060 NOXA1Q86UR1 476 aa13□□□□□ -0.33
CLN6-208ENST00000567060 OR52B4Q8NGK2 314 aa13□□□□□ -0.33
CLN6-208ENST00000567060 OR1P1Q8NH06 330 aa13□□□□□ -0.33
CLN6-208ENST00000567060 C4orf3Q8WVX3 66 aa13□□□□□ -0.33
CLN6-208ENST00000567060 SEC22CQ9BRL7 303 aa13□□□□□ -0.33
CLN6-208ENST00000567060 F11RQ9Y624 299 aaKnown RBP13□□□□□ -0.33
CLN6-208ENST00000567060 CORTO00230 105 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 SNCAP37840 140 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 HOXA1P49639 335 aaPredicted RBP12.99□□□□□ -0.33
CLN6-208ENST00000567060 KIAA0141Q14154 515 aaPredicted RBP12.99□□□□□ -0.33
CLN6-208ENST00000567060 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 OR10W1Q8NGF6 305 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 CIB3Q96Q77 187 aaPredicted RBP12.99□□□□□ -0.33
CLN6-208ENST00000567060 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 KLK15Q9H2R5 256 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 HIPK2Q9H2X6 1198 aa12.99□□□□□ -0.33
CLN6-208ENST00000567060 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 C13orf42A0A1B0GVH6 325 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 ADAP1O75689 374 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 APELAP0DMC3 54 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 HTR2BP41595 481 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 OXA1LQ15070 435 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 CXorf58Q96LI9 332 aa12.98□□□□□ -0.33
CLN6-208ENST00000567060 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 RHOGP84095 191 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 TATDN3Q17R31 274 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 FANCD2OSQ96PS1 177 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 U3KQ87 197 aa12.97□□□□□ -0.33
CLN6-208ENST00000567060 NUDT19A8MXV4 375 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 LGALS1P09382 135 aaKnown RBP12.96□□□□□ -0.33
CLN6-208ENST00000567060 ID3Q02535 119 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 ATP5G2Q06055 141 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 IAH1Q2TAA2 248 aaPredicted RBP12.96□□□□□ -0.33
CLN6-208ENST00000567060 BSXQ3C1V8 233 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 VN1R17PQ8TDU5 208 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 MS4A10Q96PG2 267 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 P2RX4Q99571 388 aa12.96□□□□□ -0.33
CLN6-208ENST00000567060 HEYLQ9NQ87 328 aaPredicted RBP12.96□□□□□ -0.33
CLN6-208ENST00000567060 I3L521 148 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 SPNP16150 400 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 MYCNOSP40205 109 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
CLN6-208ENST00000567060 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
CLN6-208ENST00000567060 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
CLN6-208ENST00000567060 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
CLN6-208ENST00000567060 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 ZNF343Q6P1L6 599 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 DTD1Q8TEA8 209 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 C2orf50Q96LR7 162 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
CLN6-208ENST00000567060 FBXL7Q9UJT9 491 aa12.95□□□□□ -0.34
CLN6-208ENST00000567060 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 G3V4G9 280 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 SYNGR2O43760 224 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 OR2J3O76001 311 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 REG1AP05451 166 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 C15orf32Q32M92 178 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 NSUN5P1Q3KNT7 163 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms