RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-210ENST00000565966 RRNAD1Q96FB5 475 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-210ENST00000565966 PEF1Q9UBV8 284 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-210ENST00000565966 NDUFB8O95169 186 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 HSPE1P61604 102 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 Q6ZRM9 215 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 ZNF429Q86V71 674 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 FAM219AQ8IW50 185 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 CENPSQ8N2Z9 138 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 IL22RA2Q969J5 263 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 GPR146Q96CH1 333 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 FBXL7Q9UJT9 491 aa10.63□□□□□ -0.71
HERPUD1-210ENST00000565966 IGLV11-55A0A075B6I3 123 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 LYRM1O43325 122 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 ANXA3P12429 323 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 DEFA4P12838 97 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 PRCDQ00LT1 54 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 FAM209BQ5JX69 171 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 SLC35G3Q8N808 338 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 FLVCR2Q9UPI3 526 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 DMRT1Q9Y5R6 373 aa10.62□□□□□ -0.71
HERPUD1-210ENST00000565966 SFT2D2O95562 160 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 TRBV12-3P01733 135 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 VAMP1P23763 118 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 MECP2P51608 486 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 SRPXP78539 464 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 PPP1R1AQ13522 171 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 ZNF846Q147U1 533 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 LGI3Q8N145 548 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 OR2C3Q8N628 320 aa10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 WDR12Q9GZL7 423 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 F11RQ9Y624 299 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-210ENST00000565966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 A0A0B4J2A0 478 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 K7EIL1 84 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 SAP30O75446 220 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 MFAP2P55001 183 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 KLF5Q13887 457 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 ANKRD55Q3KP44 614 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 AARDQ4LEZ3 155 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 SPINK9Q5DT21 86 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 LYZL2Q7Z4W2 148 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 ELOVL1Q9BW60 279 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 CACNG5Q9UF02 275 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 SHPKQ9UHJ6 478 aa10.6□□□□□ -0.71
HERPUD1-210ENST00000565966 IFNA17P01571 189 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 IGHV3-23P01764 117 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 SLC25A24Q6NUK1 477 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 LRTM2Q8N967 370 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 PDCD10Q9BUL8 212 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 THYN1Q9P016 225 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 S4R3C0 116 aa10.59□□□□□ -0.71
HERPUD1-210ENST00000565966 DUXBA0A1W2PPF3 345 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 MFSD2BA6NFX1 497 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 INS-IGF2F8WCM5 200 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 BMPR1BO00238 502 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 CYB5BO43169 146 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 UPK1BO75841 260 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 SYNJ2BPP57105 145 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 SPCS3P61009 180 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 OR1P1Q8NH06 330 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 OR52E5Q8NH55 327 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 CCDC140Q96MF4 163 aa10.58□□□□□ -0.72
HERPUD1-210ENST00000565966 TCRBP04435 133 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 OR4E1P0C645 316 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 SULT1A3P0DMM9 295 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 SULT1A4P0DMN0 295 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 ERHP84090 104 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 IFITM3Q01628 133 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 ASAH1Q13510 395 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 C20orf85Q9H1P6 137 aa10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-210ENST00000565966 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
HERPUD1-210ENST00000565966 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms