RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 PIGPP57054 158 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 CD81P60033 236 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 SCGB3A2Q96PL1 93 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 ZNF436Q9C0F3 470 aaPredicted RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
USB1-211ENST00000565662 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 RSL24D1Q9UHA3 163 aaKnown RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
USB1-211ENST00000565662 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 M0QYG6 137 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 NDUFA4O00483 81 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
USB1-211ENST00000565662 HSPE1P61604 102 aaKnown RBP12.67□□□□□ -0.38
USB1-211ENST00000565662 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
USB1-211ENST00000565662 PRRT1Q99946 306 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
USB1-211ENST00000565662 DNAH9Q9NYC9 4486 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
USB1-211ENST00000565662 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
USB1-211ENST00000565662 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 IL18Q14116 193 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 LAMTOR1Q6IAA8 161 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
USB1-211ENST00000565662 TMEM190Q8WZ59 177 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 MRGPRFQ96AM1 343 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 ISOC1Q96CN7 298 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 ABHD1Q96SE0 405 aa12.66□□□□□ -0.38
USB1-211ENST00000565662 IGHV3-23P01764 117 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 CD5P06127 495 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 C8orf88P0DMB2 117 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 GUCA2BQ16661 112 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 TRIM16LQ309B1 348 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 OR2C3Q8N628 320 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 RNASE11Q8TAA1 199 aaKnown RBP12.65□□□□□ -0.38
USB1-211ENST00000565662 DEDD2Q8WXF8 326 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 CITED4Q96RK1 184 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
USB1-211ENST00000565662 SCP2D1Q9UJQ7 156 aa12.65□□□□□ -0.38
USB1-211ENST00000565662 C15orf62A8K5M9 175 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 K7EMT4 169 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 HLA-AP01891 365 aaKnown RBP12.64□□□□□ -0.39
USB1-211ENST00000565662 UCP1P25874 307 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 FAUP35544 74 aaKnown RBP12.64□□□□□ -0.39
USB1-211ENST00000565662 SNCAP37840 140 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 PPP5CP53041 499 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 MFAP4P55083 255 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 DHODHQ02127 395 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 Q56UQ5 140 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 C19orf35Q6ZS72 473 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 MUC7Q8TAX7 377 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 C5orf66Q9H5L9 145 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 ENY2Q9NPA8 101 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 NSG2Q9Y328 171 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 CEPT1Q9Y6K0 416 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 TENM3Q9P273 2699 aa12.64□□□□□ -0.39
USB1-211ENST00000565662 OR2T8A6NH00 312 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 AP3S2P59780 193 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 SPCS2Q15005 226 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 RNASE12Q5GAN4 147 aaKnown RBP12.63□□□□□ -0.39
USB1-211ENST00000565662 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 OR13C8Q8NGS7 320 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 SCARB1Q8WTV0 552 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 FAM110AQ9BQ89 295 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
USB1-211ENST00000565662 MIXL1Q9H2W2 232 aa12.63□□□□□ -0.39
USB1-211ENST00000565662 STAB2Q8WWQ8 2551 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 K7EIM0 57 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 GSTZ1O43708 216 aaPredicted RBP12.62□□□□□ -0.39
USB1-211ENST00000565662 IFNA17P01571 189 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 IGKV1-39P01597 117 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 IGKV1D-39P04432 117 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 NPBWR1P48145 328 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 ADAMTSL5Q6ZMM2 481 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
USB1-211ENST00000565662 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
USB1-211ENST00000565662 IZUMO1RA6ND01 250 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 ZNF785A8K8V0 405 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 GNG7O60262 68 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 CMC4P56277 68 aaPredicted RBP12.61□□□□□ -0.39
USB1-211ENST00000565662 HAGHQ16775 308 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 BTNL8Q6UX41 500 aa12.61□□□□□ -0.39
USB1-211ENST00000565662 NOXA1Q86UR1 476 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms