RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 SLC25A53Q5H9E4 307 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 COX11Q9Y6N1 276 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 ARID2Q68CP9 1835 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 TPTE2P1Q5T6R2 138 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 A0A0G2JLM5 398 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 WNT9BO14905 357 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 PPBPP02775 128 aa14.75□□□□□ -0.05
SYNE3-204ENST00000555759 HOXA3O43365 443 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-204ENST00000555759 IGHV2-5P01817 119 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 WDR82Q6UXN9 313 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 SMPXQ9UHP9 88 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 CKS1BP61024 79 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 EBLN2Q6P2I7 272 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 ACP7Q6ZNF0 438 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 DUSP15Q9H1R2 295 aaPredicted RBP14.74□□□□□ -0.05
SYNE3-204ENST00000555759 MAJINQ3KP22 176 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 FER1L6-AS1Q8NA97 138 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 IGKV3-7A0A075B6H7 116 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 C16orf97H3BN30 126 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 CD5LO43866 347 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 LOXL4Q96JB6 756 aa14.74□□□□□ -0.05
SYNE3-204ENST00000555759 NXT2Q9NPJ8 142 aaKnown RBP14.74□□□□□ -0.05
SYNE3-204ENST00000555759 TDRD15B5MCY1 1934 aaKnown RBP14.74□□□□□ -0.05
SYNE3-204ENST00000555759 IGKV1D-8A0A087WSZ0 117 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 IGKV3D-11A0A0A0MRZ8 115 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 FOXL2P58012 376 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 Q9H3A6 140 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 CTSBP07858 339 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 CCL8P80075 99 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 ZNF585BQ52M93 769 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 TRAV24A0A0B4J272 114 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 CELA2AP08217 269 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 C3orf79P0CE67 100 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 EFNB3Q15768 340 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 SNHG12Q9BXW3 62 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 EPDR1Q9UM22 224 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 A8MWV9 139 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 ITGB1BP1O14713 200 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 LEPP41159 167 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 LOXL3P58215 753 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 GCSAMLQ5JQS6 135 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 PIKFYVEQ9Y2I7 2098 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 OTOFQ9HC10 1997 aa14.73□□□□□ -0.05
SYNE3-204ENST00000555759 REG1AP05451 166 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 GEMIN7Q9H840 131 aaKnown RBP14.72□□□□□ -0.05
SYNE3-204ENST00000555759 ZNF638Q14966 1978 aaKnown RBP14.72□□□□□ -0.05
SYNE3-204ENST00000555759 HTN1P15515 57 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 LEAP2Q969E1 77 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 ZFAND6Q6FIF0 208 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 GAGE12BA1L429 117 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 CD55P08174 381 aa14.72□□□□□ -0.05
SYNE3-204ENST00000555759 TM4SF5O14894 197 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 CACNG7P62955 275 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 PRR33A8MZF0 331 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 FAM106CPP0CH98 169 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 OR5AN1Q8NGI8 311 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 MPV17L2Q567V2 206 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 MEIG1Q5JSS6 88 aa14.71□□□□□ -0.05
SYNE3-204ENST00000555759 POLR3KQ9Y2Y1 108 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-204ENST00000555759 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.06
SYNE3-204ENST00000555759 FOXI3A8MTJ6 420 aaPredicted RBP14.71□□□□□ -0.06
SYNE3-204ENST00000555759 NMSQ5H8A3 153 aa14.71□□□□□ -0.06
SYNE3-204ENST00000555759 FAM90A2PQ658T7 463 aa14.71□□□□□ -0.06
SYNE3-204ENST00000555759 IFI27L1Q96BM0 104 aa14.71□□□□□ -0.06
SYNE3-204ENST00000555759 LYZL4Q96KX0 146 aa14.71□□□□□ -0.06
SYNE3-204ENST00000555759 CFHR5Q9BXR6 569 aa14.71□□□□□ -0.06
SYNE3-204ENST00000555759 GREB1LQ9C091 1923 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-204ENST00000555759 C15orf61A6NNL5 157 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 NPIPB11E5RHQ5 1161 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 RPP25LQ8N5L8 163 aaKnown RBP14.7□□□□□ -0.06
SYNE3-204ENST00000555759 SP7Q8TDD2 431 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-204ENST00000555759 GP6Q9HCN6 339 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 FAM90A1Q86YD7 464 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 TGFBR3LH3BV60 316 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 ZNHIT1O43257 154 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 IGKCP01834 107 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 CFPP27918 469 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 FGF11Q92914 225 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 SPANXA1Q9NS26 97 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 TMEM74BQ9NUR3 256 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 CGB1A6NKQ9 187 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 GAGE2BQ13066 116 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 GAGE2EQ4V326 116 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 COQ2Q96H96 371 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 GAGE2DQ9UEU5 116 aa14.7□□□□□ -0.06
SYNE3-204ENST00000555759 PCOLCEQ15113 449 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 KLF2Q9Y5W3 355 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-204ENST00000555759 AHRRA9YTQ3 701 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 NDUFA3O95167 84 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 C1orf185Q5T7R7 199 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 OR13A1Q8NGR1 328 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 PEAR1Q5VY43 1037 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-204ENST00000555759 PSG1P11464 419 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 Q0VG73 95 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 WFDC3Q8IUB2 231 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 TRIP12Q14669 1992 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-204ENST00000555759 COX6A1P12074 109 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 PAX2Q02962 417 aa14.69□□□□□ -0.06
SYNE3-204ENST00000555759 IGHV3-48P01763 117 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms