RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 BTNL8Q6UX41 500 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 GPHB5Q86YW7 130 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 TOMM5Q8N4H5 51 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 TMEM167AQ8TBQ9 72 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 ZFAND1Q8TCF1 268 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 CD300LFQ8TDQ1 290 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
RAB5C-203ENST00000546881 C14orf166Q9Y224 244 aaKnown RBP8.6□□□□□ -1.03
RAB5C-203ENST00000546881 ANKRD20A5PA0PJZ0 165 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 TMEM213A2RRL7 107 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 PGLYRP1O75594 196 aaPredicted RBP8.59□□□□□ -1.03
RAB5C-203ENST00000546881 ZNF735P0CB33 412 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 MAS1LP35410 378 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 UCP3P55916 312 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 ANKRD55Q3KP44 614 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 TM4SF20Q53R12 229 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 OR4A47Q6IF82 309 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
RAB5C-203ENST00000546881 PUSL1Q8N0Z8 303 aaKnown RBP8.59□□□□□ -1.03
RAB5C-203ENST00000546881 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 OR4C16Q8NGL9 310 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 FANCD2OSQ96PS1 177 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 PRRT1Q99946 306 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 HRASLSQ9HDD0 168 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 COPZ2Q9P299 210 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 SCP2D1Q9UJQ7 156 aa8.59□□□□□ -1.03
RAB5C-203ENST00000546881 IGHV3-35A0A0C4DH35 117 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 A0A1B0GW64 132 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 HPRT1P00492 218 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 CLEC3BP05452 202 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
RAB5C-203ENST00000546881 HLA-GP17693 338 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 PI3P19957 117 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 GPR183P32249 361 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
RAB5C-203ENST00000546881 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
RAB5C-203ENST00000546881 ZNF585BQ52M93 769 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 GDPD1Q8N9F7 314 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 OR1L6Q8NGR2 347 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 TERB2Q8NHR7 220 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 MARCH1Q8TCQ1 289 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
RAB5C-203ENST00000546881 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 A0A0J9YWU9 116 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 A8MWP6 167 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 RBFOX2O43251 390 aaKnown RBP eCLIP8.57□□□□□ -1.04
RAB5C-203ENST00000546881 S1PR2O95136 353 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 CRYGCP07315 174 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 RPA2P15927 270 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 NQO2P16083 231 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 CTRB1P17538 263 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 F2RP25116 425 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 LPAR6P43657 344 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 PIGPP57054 158 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 BRWD1-AS2P59051 145 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 TAS2R31P59538 309 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 CTRB2Q6GPI1 263 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 UNQ9165/PRO28630Q6UXU0 137 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 LHFPL1Q86WI0 220 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 OR51S1Q8NGJ8 323 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 OR13C8Q8NGS7 320 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 ZNF486Q96H40 463 aaPredicted RBP8.57□□□□□ -1.04
RAB5C-203ENST00000546881 CXorf58Q96LI9 332 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 SCGB3A2Q96PL1 93 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 UBQLN2Q9UHD9 624 aa8.57□□□□□ -1.04
RAB5C-203ENST00000546881 IGLV11-55A0A075B6I3 123 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 TEX13DA0A0J9YY54 714 aaPredicted RBP8.56□□□□□ -1.04
RAB5C-203ENST00000546881 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 SERPINE2P07093 398 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 IL7P13232 177 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 BAK1Q16611 211 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 TRIM16LQ309B1 348 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 PLET1Q6UQ28 207 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 RNASE11Q8TAA1 199 aaKnown RBP8.56□□□□□ -1.04
RAB5C-203ENST00000546881 PLEKHA2Q9HB19 425 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 COMMD9Q9P000 198 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 TBC1D24Q9ULP9 559 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 UFC1Q9Y3C8 167 aa8.56□□□□□ -1.04
RAB5C-203ENST00000546881 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 CGB1A6NKQ9 187 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 SPRY2O43597 315 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 KRASP01116 189 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-203ENST00000546881 APOC4P55056 127 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 OR2B8PP59922 312 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 RND3P61587 244 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 EWSR1Q01844 656 aaKnown RBP eCLIP8.55□□□□□ -1.04
RAB5C-203ENST00000546881 KLF9Q13886 244 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-203ENST00000546881 SURF2Q15527 256 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-203ENST00000546881 DEFB135Q30KP9 77 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 LYG2Q86SG7 212 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 OR2C3Q8N628 320 aa8.55□□□□□ -1.04
RAB5C-203ENST00000546881 OR4A5Q8NH83 315 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms