RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ACP7Q6ZNF0 438 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 PRR7Q8TB68 274 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 WDR83OSQ9Y284 106 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 COL4A6Q14031 1691 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 C7orf71A4D174 169 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 MOSP00540 346 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 CD3EP07766 207 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 CFPP27918 469 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 FOXL1Q12952 345 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 HIGD1CA8MV81 97 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 FCGR2BP31994 310 aaPredicted RBP16.26■□□□□ 0.19
SUDS3-204ENST00000543473 GNB1LQ9BYB4 327 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 OSTCQ9NRP0 149 aa16.26■□□□□ 0.19
SUDS3-204ENST00000543473 LINC01551Q86U37 167 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 TRAV24A0A0B4J272 114 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 EFNA2O43921 213 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 APOHP02749 345 aaPredicted RBP16.25■□□□□ 0.19
SUDS3-204ENST00000543473 OR4A5Q8NH83 315 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 DEPPQ9NTK1 212 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 SAPCD1Q5SSQ6 148 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 C10orf91Q5T1B1 145 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 DCTN5Q9BTE1 182 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 NBASA2RRP1 2371 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 TIMP3P35625 211 aa16.25■□□□□ 0.19
SUDS3-204ENST00000543473 C16orf97H3BN30 126 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 MBNL2Q5VZF2 373 aaKnown RBP16.24■□□□□ 0.19
SUDS3-204ENST00000543473 OR1N2Q8NGR9 330 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 CFHR1Q03591 330 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 LDLRAD2Q5SZI1 272 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 IGKV1-27A0A075B6S5 117 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 LINC00614P0C842 121 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 CRYGSP22914 178 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 MRPL14Q6P1L8 145 aaKnown RBP16.24■□□□□ 0.19
SUDS3-204ENST00000543473 SPSB3Q6PJ21 355 aa16.24■□□□□ 0.19
SUDS3-204ENST00000543473 PI4KAP42356 2102 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 FAM90A2PQ658T7 463 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 SSBP4Q9BWG4 385 aaPredicted RBP16.23■□□□□ 0.19
SUDS3-204ENST00000543473 IGLV3-32A0A0A0MS00 114 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 A0A1W2PRS3 328 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 A8MWP6 167 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 ACTL10Q5JWF8 245 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 IGKV3-7A0A075B6H7 116 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 A0A1B0GUT8 65 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 C5orf63A6NC05 138 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 RPS20P60866 119 aaKnown RBP16.23■□□□□ 0.19
SUDS3-204ENST00000543473 OR10J3Q5JRS4 329 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 PEAR1Q5VY43 1037 aaPredicted RBP16.23■□□□□ 0.19
SUDS3-204ENST00000543473 TMEM144Q7Z5S9 345 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 RPP21Q9H633 154 aaKnown RBP16.23■□□□□ 0.19
SUDS3-204ENST00000543473 SOX21Q9Y651 276 aaPredicted RBP16.23■□□□□ 0.19
SUDS3-204ENST00000543473 IGHV2-5P01817 119 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 FDCSPQ8NFU4 85 aa16.23■□□□□ 0.19
SUDS3-204ENST00000543473 PRR33A8MZF0 331 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 TMEM78Q5T7P6 136 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 DGAT2L7PQ6IED9 249 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 SPCS1Q9Y6A9 102 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 IGLV3-12A0A075B6K2 115 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 AHRRA9YTQ3 701 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 EREGO14944 169 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 CD33P20138 364 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 MESP1Q9BRJ9 268 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 CCL21O00585 134 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 GPR183P32249 361 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 C1orf185Q5T7R7 199 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 SIGLEC12Q96PQ1 595 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 RAB1BQ9H0U4 201 aa16.22■□□□□ 0.19
SUDS3-204ENST00000543473 CELA3AP09093 270 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 TCF20Q9UGU0 1960 aaKnown RBP16.21■□□□□ 0.19
SUDS3-204ENST00000543473 AKAP6Q13023 2319 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 A0A1B0GV72 72 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 ZNF497Q6ZNH5 498 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 PLAURQ03405 335 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 PSG7Q13046 419 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 EFNB3Q15768 340 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 IMMP1LQ96LU5 166 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 C18orf15Q96N68 181 aa16.21■□□□□ 0.19
SUDS3-204ENST00000543473 GPR82Q96P67 336 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 AGMATQ9BSE5 352 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 A0A0G2JMM0 328 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 A0A1W2PPB8 328 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 KIR3DP1A8MWS1 328 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 TMEM30BQ3MIR4 351 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 DNM1P46Q6ZS02 220 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 DERL1Q9BUN8 251 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 H3BUT2 72 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 UMODP07911 640 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 TM4SF20Q53R12 229 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 PRELID3AQ96N28 172 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 ANOS1P23352 680 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 RBPMS2Q6ZRY4 209 aaKnown RBP16.2■□□□□ 0.18
SUDS3-204ENST00000543473 OSR1Q8TAX0 266 aaPredicted RBP16.2■□□□□ 0.18
SUDS3-204ENST00000543473 CHODLQ9H9P2 273 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 THADAQ6YHU6 1953 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 MYLKQ15746 1914 aa16.2■□□□□ 0.18
SUDS3-204ENST00000543473 TRAV8-6A0A0B4J262 113 aa16.19■□□□□ 0.18
SUDS3-204ENST00000543473 SRSF7Q16629 238 aaKnown RBP eCLIP16.19■□□□□ 0.18
SUDS3-204ENST00000543473 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
SUDS3-204ENST00000543473 OR52E5Q8NH55 327 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms