RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 EGR2P11161 476 aaPredicted RBP8.43□□□□□ -1.06
DDB1-221ENST00000543162 CXCL2P19875 107 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 NPY1RP25929 384 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.061e-6■■■■■ 30.7
DDB1-221ENST00000543162 ATP5IP56385 69 aaPredicted RBP8.43□□□□□ -1.06
DDB1-221ENST00000543162 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.061e-6■□□□□ 10.3
DDB1-221ENST00000543162 TMEM267Q0VDI3 215 aaPredicted RBP8.43□□□□□ -1.06
DDB1-221ENST00000543162 OR2F1Q13607 317 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 SLC35E3Q7Z769 313 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 STX12Q86Y82 276 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 C9orf62Q8N4C0 152 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 SGMS2Q8NHU3 365 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 FBXO7Q9Y3I1 522 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 A0A0D9SG52 128 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 LINC01548A6NM66 108 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 CLDN34H7C241 214 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 TRIM77I1YAP6 450 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 CST7O76096 145 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 SCAF4O95104 1147 aaKnown RBP8.42□□□□□ -1.06
DDB1-221ENST00000543162 IGHG2P01859 326 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 IFNA4P05014 189 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 OR8U8P0C7N1 319 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
DDB1-221ENST00000543162 SULT1A1P50225 295 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 HILS1P60008 231 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 RAB11AP62491 216 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 NHLH2Q02577 135 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 BAXQ07812 192 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 ZNF345Q14585 488 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 BSXQ3C1V8 233 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
DDB1-221ENST00000543162 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 OR8G2PQ6IF36 304 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 UNQ5815/PRO19632Q6UWF5 114 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 TMEM14EPQ6UXP3 125 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 KCNRGQ8N5I3 272 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 LFNGQ8NES3 379 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 P2RX4Q99571 388 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 PRSS22Q9GZN4 317 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 HSPB11Q9Y547 144 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 NSD1Q96L73 2696 aaPredicted RBP8.42□□□□□ -1.06
DDB1-221ENST00000543162 SVEP1Q4LDE5 3571 aa8.42□□□□□ -1.06
DDB1-221ENST00000543162 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 AP4M1O00189 453 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 DEFA4P12838 97 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 C4BPBP20851 252 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 HBG1P69891 147 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 HBG2P69892 147 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 ECSCRQ19T08 205 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
DDB1-221ENST00000543162 ASPHD1Q5U4P2 390 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 LAMTOR1Q6IAA8 161 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 ETV3LQ6ZN32 361 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 Q6ZS46 218 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 TMEM217Q8N7C4 229 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 OR10P1Q8NGE3 313 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 TMEM68Q96MH6 324 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 ARL6Q9H0F7 186 aa8.41□□□□□ -1.06
DDB1-221ENST00000543162 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
DDB1-221ENST00000543162 FN1P02751 2386 aaKnown RBP8.41□□□□□ -1.06
DDB1-221ENST00000543162 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 KANTRA0A1W2PQU2 76 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 G3V318 75 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 CYB5BO43169 146 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 FBXO24O75426 580 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 IGF1P05019 195 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 CRYBA1P05813 215 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 CRYGCP07315 174 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
DDB1-221ENST00000543162 CTRB1P17538 263 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 S100A11P31949 105 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 CRIP2P52943 208 aaPredicted RBP8.4□□□□□ -1.06
DDB1-221ENST00000543162 UBA52P62987 128 aaKnown RBP8.4□□□□□ -1.06
DDB1-221ENST00000543162 AKIRIN2Q53H80 203 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 HAPLN4Q86UW8 402 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 OR5T1Q8NG75 326 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 OR1S2Q8NGQ3 325 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 OR1L6Q8NGR2 347 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 OR1P1Q8NH06 330 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 BSCL2Q96G97 398 aaPredicted RBP8.4□□□□□ -1.06
DDB1-221ENST00000543162 SMIM3Q9BZL3 60 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 ZNF702PQ9H963 129 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 FBXL17Q9UF56 701 aa8.4□□□□□ -1.06
DDB1-221ENST00000543162 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 CORTO00230 105 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 TAAR5O14804 337 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 BCL2L11O43521 198 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 RPL15P61313 204 aaKnown RBP8.39□□□□□ -1.07
DDB1-221ENST00000543162 SLC38A11Q08AI6 406 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms