RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 S1PR3Q99500 378 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TCF19Q9Y242 345 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TRAV3A0A0B4J244 114 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 OR4C46A6NHA9 309 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 MRPL49Q13405 166 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 SPINK14Q6IE38 97 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 BCL2L2Q92843 193 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 HEATR1Q9H583 2144 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 HCFC1P51610 2035 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 FOXF2Q12947 444 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 TMEM108Q6UXF1 575 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 MDP1Q86V88 176 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 DUSP23Q9BVJ7 150 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 TECRQ9NZ01 308 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 PINLYPA6NC86 204 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 IZUMO1RA6ND01 250 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 OR2T8A6NH00 312 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 GFRA3O60609 400 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 AMMECR1LQ6DCA0 310 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 EBLN2Q6P2I7 272 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 OR13A1Q8NGR1 328 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
SFSWAP-209ENST00000540469 CELA3AP09093 270 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 TAS2R45P59539 299 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 ZNF146Q15072 292 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 MORN2Q502X0 79 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 NABP2Q9BQ15 211 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 TMEM70Q9BUB7 260 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 TMEM140Q9NV12 185 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 B4GALT7Q9UBV7 327 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 SVILO95425 2214 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 K7ERU9 68 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 ISLRO14498 428 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 KLF7O75840 302 aaPredicted RBP10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 APOA2P02652 100 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 AREGP15514 252 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 RPL39P5Q59GN2 51 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 MUC15Q8N387 334 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
SFSWAP-209ENST00000540469 REG1AP05451 166 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 A0A1W2PN81 502 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 hDV102S1A0JD36 115 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 SLC35E4Q6ICL7 350 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 PRO3102Q9H379 93 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 MUC21A0A0G2JKD1 596 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 MUC21A0A140T8X8 626 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 SH2D7A6NKC9 451 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 SPACA3Q8IXA5 215 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 WDR31Q8NA23 367 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 FAM168AQ92567 244 aa10.61□□□□□ -0.71
SFSWAP-209ENST00000540469 SAP30O75446 220 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 DUTP33316 252 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 COQ2Q96H96 371 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 LINC00479Q96M42 142 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 OR2V2Q96R30 315 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 DUSP13Q9UII6 198 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 TNRC6AQ8NDV7 1962 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 ERVK11-1P61568 191 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 IL11RAQ14626 422 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 TNFRSF19Q9NS68 423 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 LOXL2Q9Y4K0 774 aa10.6□□□□□ -0.71
SFSWAP-209ENST00000540469 J3QW42 95 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 CYC1P08574 325 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 VDAC2P45880 294 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 OR8B3Q8NGG8 313 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 CELA3BP08861 270 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 GABRA6Q16445 453 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 C12orf54Q6X4T0 127 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 KIR3DL3Q8N743 410 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 TMEM191AQ9H0A3 160 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 MEGF9Q9H1U4 602 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 GP6Q9HCN6 339 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 IGKV3D-15A0A087WSY6 115 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 MAFAQ8NHW3 353 aaPredicted RBP10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 FZR1Q9UM11 496 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 TNCP24821 2201 aa10.59□□□□□ -0.71
SFSWAP-209ENST00000540469 NCKAP5O14513 1909 aa10.58□□□□□ -0.72
SFSWAP-209ENST00000540469 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
SFSWAP-209ENST00000540469 AHRRA9YTQ3 701 aa10.58□□□□□ -0.72
SFSWAP-209ENST00000540469 SS18L1O75177 396 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms