RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
SCNN1A-215ENST00000540037 TNRC18O15417 2968 aaPredicted RBP11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 ADH4P08319 380 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 AREGP15514 252 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 SMIM21Q3B7S5 101 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 CRYABP02511 175 aaKnown RBP11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 FAM201AQ5SY85 155 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 OR52E5Q8NH55 327 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 CLEC7AQ9BXN2 247 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 UQCR10Q9UDW1 63 aa11.42□□□□□ -0.58
SCNN1A-215ENST00000540037 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 C15orf61A6NNL5 157 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 TNFSF15O95150 251 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 MT-CO2P00403 227 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 ERASQ7Z444 233 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 IL19Q9UHD0 177 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 PRRX1P54821 245 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 TIGITQ495A1 244 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 CNEP1R1Q8N9A8 125 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 TECRQ9NZ01 308 aaKnown RBP11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 DUX4L9Q6RFH8 374 aaPredicted RBP11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 ZNF439Q8NDP4 499 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 OR9G1Q8NH87 305 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 LY96Q9Y6Y9 160 aa11.41□□□□□ -0.58
SCNN1A-215ENST00000540037 TRGV5A0A0B4J1U4 118 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 A0A1W2PN81 502 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 AMY1AP04745 511 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 GNG10P50151 68 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 TNXAQ16473 311 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 GDF5OSQ5U4N7 250 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 DDB2Q92466 427 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 APCSP02743 223 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 C18orf32Q8TCD1 76 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 SPRY4Q9C004 299 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 ABI3Q9P2A4 366 aa11.4□□□□□ -0.58
SCNN1A-215ENST00000540037 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.59
SCNN1A-215ENST00000540037 SAA2-SAA4A0A096LPE2 208 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 SAA2P0DJI9 122 aaPredicted RBP11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 PTTG1IPP53801 180 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 RAB31Q13636 194 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 Q56UQ5 140 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 WDR73Q6P4I2 378 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 SPATA12Q7Z6I5 190 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 NEUROG1Q92886 237 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 PLEKHA3Q9HB20 300 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 ZNF355PQ9NSJ1 428 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 COL27A1Q8IZC6 1860 aaPredicted RBP11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 TRGV8A0A0C4DH27 118 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 C20orf202A1L168 122 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 J3QW42 95 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 MT-ND6P03923 174 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 CD24P25063 80 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 TSPOP30536 169 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 HSPE1P61604 102 aaKnown RBP11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 SGK494Q96LW2 274 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
SCNN1A-215ENST00000540037 DSCAMO60469 2012 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 SMIM27A0A1W2PRY6 76 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 CER1O95813 267 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 IGHV3-48P01763 117 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 CECR9P0C854 216 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 RPL8P62917 257 aaKnown RBP11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 MSMPQ1L6U9 139 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 EBLN2Q6P2I7 272 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 VWA1Q6PCB0 445 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 ST6GALNAC6Q969X2 333 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 IGF2BP2-AS1Q96M15 143 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 ENY2Q9NPA8 101 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 JPT1Q9UK76 154 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 PMCHL1Q16048 86 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 MDS2Q8NDY4 140 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 KLRC4-KLRK1H3BQV0 150 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 ISLRO14498 428 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 CD46P15529 392 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms