RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC25A22Q9H936 323 aa13.94□□□□□ -0.18
PCDHB17P-201ENST00000539533 MALRD1Q5VYJ5 2156 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 HMGB3O15347 200 aaKnown RBP13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 COA6Q5JTJ3 125 aaKnown RBP13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR5B12Q96R08 314 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 ASH1LQ9NR48 2969 aaKnown RBP13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 M0R143 59 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 RAB29O14966 203 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 DLX6P56179 175 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM155Q4W5P6 130 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 SLC25A48Q6ZT89 311 aaKnown RBP13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 RAB1CQ92928 201 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 PARLQ9H300 379 aa13.93□□□□□ -0.18
PCDHB17P-201ENST00000539533 FCGR3BO75015 233 aa13.92□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM30BQ3MIR4 351 aa13.92□□□□□ -0.18
PCDHB17P-201ENST00000539533 TIMD4Q96H15 378 aa13.92□□□□□ -0.18
PCDHB17P-201ENST00000539533 CHODLQ9H9P2 273 aa13.92□□□□□ -0.18
PCDHB17P-201ENST00000539533 CTXND1A0A1B0GTU2 59 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 MBP02144 154 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 MRPL41Q8IXM3 137 aaKnown RBP13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 C11orf42Q8N5U0 333 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 ELOVL1Q9BW60 279 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 UBR5O95071 2799 aaPredicted RBP13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 HRASP01112 189 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 C21orf62-AS1Q17RA5 79 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 CLEC12BQ2HXU8 276 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 TEX38Q6PEX7 206 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 TCTEX1D1Q8N7M0 179 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 GATAD1Q8WUU5 269 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM18Q96B42 140 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 PCGF1Q9BSM1 259 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 HSPB7Q9UBY9 170 aa13.91□□□□□ -0.18
PCDHB17P-201ENST00000539533 RAB4AP20338 218 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 IQCJQ1A5X6 159 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR10G9Q8NGN4 311 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR10G7Q8NGN6 311 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR4F5Q8NH21 305 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 ACY3Q96HD9 319 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR4F4Q96R69 305 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM147Q9BVK8 224 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 MARCH11A6NNE9 402 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 P0C879 139 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 FAM3BP58499 235 aaPredicted RBP13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 SRSF1Q07955 248 aaKnown RBP eCLIP13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR8B3Q8NGG8 313 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM170AQ8WVE7 144 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 TMEM37Q8WXS4 190 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 NEIL1Q96FI4 390 aaPredicted RBP13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 OR8B2Q96RD0 313 aa13.9□□□□□ -0.18
PCDHB17P-201ENST00000539533 A0A1W2PPQ1 181 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 DLX1P56177 255 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 ERVFC1-1P60608 527 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 ATP6V1FQ16864 119 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 DDB2Q92466 427 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 CRYBG3Q68DQ2 2970 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 PDLIM4P50479 330 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 FFAR4Q5NUL3 377 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 R3HDM4Q96D70 268 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 S1PR3Q99500 378 aa13.89□□□□□ -0.19
PCDHB17P-201ENST00000539533 IGHV1-8P0DP01 117 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 ANAPC16Q96DE5 110 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 FUT9Q9Y231 359 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 SCGB1D1O95968 90 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 HPRT1P00492 218 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 EFNA4P52798 201 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 ACTL10Q5JWF8 245 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 VKORC1L1Q8N0U8 176 aa13.88□□□□□ -0.19
PCDHB17P-201ENST00000539533 PPIAL4CA0A0B4J2A2 164 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 PMS2P5A8MQ11 134 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 GGCTO75223 188 aaKnown RBP13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 PPIAL4GP0DN37 164 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 H2BFWTQ7Z2G1 175 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR2T10Q8NGZ9 312 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 ARHGAP32A7KAX9 2087 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 J3QR06 171 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 OVOL3O00110 214 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 PAGE4O60829 102 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 CT45A6P0DMU7 189 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 CT45A5P0DMU8 189 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 CT45A7P0DMV0 189 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 GPR6P46095 362 aaPredicted RBP13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 THBS3P49746 956 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 NPCDR1Q9BY65 106 aa13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 PATZ1Q9HBE1 687 aaKnown RBP13.87□□□□□ -0.19
PCDHB17P-201ENST00000539533 C22orf46C9J442 243 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 RBFOX2O43251 390 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 SRP14P37108 136 aaKnown RBP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 GNB2P62879 340 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 GOLT1BQ9Y3E0 138 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 CBY1Q9Y3M2 126 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 VENTXO95231 258 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 TYMSP04818 313 aa13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 RPS16P62249 146 aaKnown RBP13.86□□□□□ -0.19
PCDHB17P-201ENST00000539533 DIAPH2-AS1Q14236 149 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms