RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 MAS1LP35410 378 aa16.19■□□□□ 0.18
TNFRSF1A-205ENST00000534885 ETV3LQ6ZN32 361 aa16.19■□□□□ 0.18
TNFRSF1A-205ENST00000534885 LINC00052Q96N35 136 aa16.19■□□□□ 0.18
TNFRSF1A-205ENST00000534885 GINS3Q9BRX5 216 aa16.19■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RFNGQ9Y644 331 aa16.19■□□□□ 0.18
TNFRSF1A-205ENST00000534885 APELAP0DMC3 54 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 MEGF9Q9H1U4 602 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 FAM96BQ9Y3D0 163 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 A0A1W2PN81 502 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 PRSS46E5RG02 174 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 IFNA4P05014 189 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 CHRNA7P36544 502 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RUNX1Q01196 453 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 BSXQ3C1V8 233 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 CYB5R2Q6BCY4 276 aa16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 PINX1Q96BK5 328 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1A-205ENST00000534885 IGLC7A0M8Q6 106 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 INS-IGF2F8WCM5 200 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SMAD7O15105 426 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 OR13C7P0DN81 318 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RNASE2P10153 161 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 RAB11AP62491 216 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 PIFOQ8TCI5 191 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SRSF12Q8WXF0 261 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SLC25A32Q9H2D1 315 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 PLA2G2EQ9NZK7 142 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 UBE2L5PA0A1B0GUS4 154 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 KRBOX1C9JBD0 128 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 REG1AP05451 166 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 ATP6V0CP27449 155 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SNCAP37840 140 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 ERHP84090 104 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 TUSC1Q2TAM9 212 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 TLN2Q9Y4G6 2542 aa16.17■□□□□ 0.18
TNFRSF1A-205ENST00000534885 TEX22C9J3V5 150 aa16.16■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SPP1P10451 314 aa16.16■□□□□ 0.18
TNFRSF1A-205ENST00000534885 Q8N9W7 124 aa16.16■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SSX3Q99909 188 aa16.16■□□□□ 0.18
TNFRSF1A-205ENST00000534885 CNIH1O95406 144 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 IFNA5P01569 189 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 FBP1P09467 338 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 AREGP15514 252 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 C2orf83Q53S99 150 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 SLC25A24Q6NUK1 477 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 HSD17B13Q7Z5P4 300 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 C22orf15Q8WYQ4 148 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 TMEM147Q9BVK8 224 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 UQCC1Q9NVA1 299 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 ATP6V1FQ16864 119 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 TMEM219Q86XT9 240 aa16.15■□□□□ 0.18
TNFRSF1A-205ENST00000534885 MDFIC2A0A1B0GVS7 189 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SEC11BP0C7V7 166 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 LRRC75BQ2VPJ9 315 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 EIF5AL1Q6IS14 154 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 C19orf35Q6ZS72 473 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 BCL6BQ8N143 479 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 EIF4E3Q8N5X7 224 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 P2RX4Q99571 388 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FAM103A1Q9BTL3 118 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 WDR61Q9GZS3 305 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FAM157CP0CG43 387 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FXYD3Q14802 87 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 VWC2Q2TAL6 325 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SSMEM1Q8WWF3 244 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 RSG1Q9BU20 258 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 C1RLQ9NZP8 487 aa16.14■□□□□ 0.17
TNFRSF1A-205ENST00000534885 NOTCH2Q04721 2471 aa16.13■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SCAF4O95104 1147 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-205ENST00000534885 FSHBP01225 129 aa16.13■□□□□ 0.17
TNFRSF1A-205ENST00000534885 CX3CL1P78423 397 aa16.13■□□□□ 0.17
TNFRSF1A-205ENST00000534885 NDPQ00604 133 aa16.13■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MYO9AB2RTY4 2548 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ZNF562Q6V9R5 426 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SCGB1C1Q8TD33 95 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ARSJQ5FYB0 599 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 PXDC1Q5TGL8 231 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 OR2G3Q8NGZ4 309 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 NANPQ8TBE9 248 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 RNF141Q8WVD5 230 aa16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 TAF15Q92804 592 aaKnown RBP eCLIP16.12■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ACANP16112 2415 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SMCO3A2RU48 225 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 H3BUX3 64 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 CTRB1P17538 263 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SULT1A2P50226 295 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ATP5IP56385 69 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 DLK1P80370 383 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 CTRB2Q6GPI1 263 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 GNPNAT1Q96EK6 184 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 SLC25A33Q9BSK2 321 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 PARD6GQ9BYG4 376 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MXRA5Q9NR99 2828 aa16.11■□□□□ 0.17
TNFRSF1A-205ENST00000534885 BPIFB3P59826 476 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 DEFB112Q30KQ8 113 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 TMEM182Q6ZP80 229 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 MRPL41Q8IXM3 137 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 ABHD5Q8WTS1 349 aa16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 RBM14Q96PK6 669 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-205ENST00000534885 RASL11BQ9BPW5 248 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms