RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 COMMD3Q9UBI1 195 aa13.29□□□□□ -0.28
PCF11-206ENST00000533018 A0A087WXM4 84 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 NDUFA4O00483 81 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 SNX29P2Q8IUI4 249 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 OR5B3Q8NH48 314 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 TSC22D3Q99576 134 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 CHRDL1Q9BU40 450 aa13.28□□□□□ -0.28
PCF11-206ENST00000533018 TSPAN4O14817 238 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 EIF4EP06730 217 aaKnown RBP13.27□□□□□ -0.29
PCF11-206ENST00000533018 APOC4P55056 127 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 TBC1D26Q86UD7 250 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 OR4A16Q8NH70 328 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 SLC25A46Q96AG3 418 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 MISP3Q96FF7 219 aa13.27□□□□□ -0.29
PCF11-206ENST00000533018 DBX1A6NMT0 343 aa13.26□□□□□ -0.29
PCF11-206ENST00000533018 YIF1AO95070 293 aa13.26□□□□□ -0.29
PCF11-206ENST00000533018 H2BFWTQ7Z2G1 175 aa13.26□□□□□ -0.29
PCF11-206ENST00000533018 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 OR4C46A6NHA9 309 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 K7EIM0 57 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 NUPL2O15504 423 aaKnown RBP13.25□□□□□ -0.29
PCF11-206ENST00000533018 TNFAIP8O95379 198 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 PMS2P11Q13670 270 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 DEFB135Q30KP9 77 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 CADM3Q8N126 398 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 GPX8Q8TED1 209 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 ATP6V0BQ99437 205 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
PCF11-206ENST00000533018 A0A0J9YWU9 116 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 SPRY2O43597 315 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
PCF11-206ENST00000533018 ADMP35318 185 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 VBP1P61758 197 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 NCS1P62166 190 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 RELQ04864 619 aaPredicted RBP13.24□□□□□ -0.29
PCF11-206ENST00000533018 STPG3Q8N7X2 389 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
PCF11-206ENST00000533018 SCPEP1Q9HB40 452 aa13.24□□□□□ -0.29
PCF11-206ENST00000533018 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 F8W735 103 aaPredicted RBP13.23□□□□□ -0.29
PCF11-206ENST00000533018 K7EMT4 169 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 APOA1P02647 267 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 CTSGP08311 255 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 RPL35AP18077 110 aaKnown RBP13.23□□□□□ -0.29
PCF11-206ENST00000533018 BMI1P35226 326 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 RCVRNP35243 200 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 MFAP4P55083 255 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 Q6ZWC4 215 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 MRGPRFQ96AM1 343 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 SEC22AQ96IW7 307 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 ALMS1Q8TCU4 4167 aa13.23□□□□□ -0.29
PCF11-206ENST00000533018 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 FAM25AB3EWG3 89 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 FAM25CB3EWG5 89 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 FAM25GB3EWG6 89 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 UBE2CO00762 179 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 HPGDSO60760 199 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 ELK1P19419 428 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 TFPI2P48307 235 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 RNASE12Q5GAN4 147 aaKnown RBP13.22□□□□□ -0.29
PCF11-206ENST00000533018 LYG2Q86SG7 212 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 TMEM116Q8NCL8 245 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 RNF2Q99496 336 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 FAM212BQ9NTI7 297 aaPredicted RBP13.22□□□□□ -0.29
PCF11-206ENST00000533018 SMPXQ9UHP9 88 aa13.22□□□□□ -0.29
PCF11-206ENST00000533018 M0QYG6 137 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 GNG7O60262 68 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 MT-CO2P00403 227 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 PGAM2P15259 253 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 ERHP84090 104 aaKnown RBP13.21□□□□□ -0.29
PCF11-206ENST00000533018 PRCDQ00LT1 54 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 CMTM3Q96MX0 182 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.29
PCF11-206ENST00000533018 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.29
PCF11-206ENST00000533018 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 KIR2DL5BA0A0G2JN68 375 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 KIR2DL5BA0A0G2JPC4 375 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 IGHV7-4-1A0A0J9YVY3 117 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 I3L2K1 104 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 CHEK1O14757 476 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 IGKV1-39P01597 117 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 IGKV1D-39P04432 117 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 RORCP51449 518 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 UCP3P55916 312 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 KIR2DL5AQ8N109 375 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 GALNT14Q96FL9 552 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 TXN2Q99757 166 aa13.2□□□□□ -0.3
PCF11-206ENST00000533018 IGHV3OR16-13A0A075B7E8 117 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 IGHV3-74A0A0B4J1X5 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms