RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 STX19Q8N4C7 294 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 SPICQ8N5J4 248 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ZFP41Q8N8Y5 198 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OR51A4Q8NGJ6 313 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OR11L1Q8NGX0 322 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RPS4Y2Q8TD47 263 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 HAVCR2Q8TDQ0 301 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 LRRC29Q8WV35 223 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 AP3S1Q92572 193 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 IL22RA2Q969J5 263 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 SMIM19Q96E16 107 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ADAT3Q96EY9 351 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 RNF170Q96K19 258 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 FAM210BQ96KR6 192 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PGLYRP3Q96LB9 341 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 MICU1Q9BPX6 476 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PDCD1LG2Q9BQ51 273 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 C7orf50Q9BRJ6 194 aaKnown RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 TMEM246Q9BRR3 403 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 ZNF2Q9BSG1 426 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 CHRDL1Q9BU40 450 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TMED9Q9BVK6 235 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 C20orf85Q9H1P6 137 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 OR51I2Q9H344 312 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RANBP3Q9H6Z4 567 aaPredicted RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 GEMIN7Q9H840 131 aaKnown RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 PLEKHA1Q9HB21 404 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 PATZ1Q9HBE1 687 aaKnown RBP2.51□□□□□ -2.01
CD44-219ENST00000525685 TAS2R4Q9NYW5 299 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DUX4Q9UBX2 424 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 TBC1D24Q9ULP9 559 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 RAB26Q9ULW5 256 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 HHLA2Q9UM44 414 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 KCNIP3Q9Y2W7 256 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 WSB1Q9Y6I7 421 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 DYSFO75923 2080 aa2.51□□□□□ -2.01
CD44-219ENST00000525685 USF3Q68DE3 2245 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ZNF469Q96JG9 3925 aaPredicted RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 IGKV1-27A0A075B6S5 117 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TRAV26-1A0A087WT03 109 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 PNMA8CA0A1B0GUJ8 204 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 A0A1B0GV90 55 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 FABP12A6NFH5 140 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 J3QT63 122 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 FCN3O75636 299 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 LHBP01229 141 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 IFNA10P01566 189 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 PPBPP02775 128 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 S100A8P05109 93 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MSMBP08118 114 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 NBEAP1P0C6P0 100 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 CRISP2P16562 243 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 RCC1P18754 421 aaPredicted RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 ATF1P18846 271 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TBPP20226 339 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MAP2K4P45985 399 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 RAB9AP51151 201 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 CCR6P51684 374 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ATP1B3P54709 279 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 GABARAPL2P60520 117 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 RPS11P62280 158 aaKnown RBP eCLIP2.5□□□□□ -2.01
CD44-219ENST00000525685 RBX1P62877 108 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TNFRSF9Q07011 255 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MED21Q13503 144 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 RBM48Q5RL73 367 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 STUMQ69YW2 141 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 LYPD2Q6UXB3 125 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TMPRSS11AQ6ZMR5 421 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ZNF546Q86UE3 836 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 LRRC28Q86X40 367 aaPredicted RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 CALHM1Q8IU99 346 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 FAM216BQ8N7L0 139 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ZNF676Q8N7Q3 588 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 DEFB108BQ8NET1 73 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OR5A2Q8NGI9 324 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OR51A2Q8NGJ7 313 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OR1N2Q8NGR9 330 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OR51F2Q8NH61 342 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OR5AK2Q8NH90 309 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MARCH1Q8TCQ1 289 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 NEK7Q8TDX7 302 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 PP6455Q8WZ26 134 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TMEM158Q8WZ71 300 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 AQP3Q92482 292 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 C10orf35Q96D05 121 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 DGCR14Q96DF8 476 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 SEH1LQ96EE3 360 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 BORCS8Q96FH0 119 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ZNF488Q96MN9 340 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 GAFA1Q96PS6 74 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TCEAL7Q9BRU2 100 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MND1Q9BWT6 205 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 HINT2Q9BX68 163 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 CDCA4Q9BXL8 241 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 CCDC90BQ9GZT6 254 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 PPA2Q9H2U2 334 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 DUSP21Q9H596 190 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 HES4Q9HCC6 221 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms