RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SIGLEC5O15389 551 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 OR10AG1Q8NH19 301 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 Q6ZS92 163 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 ERASQ7Z444 233 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 WFIKKN1Q96NZ8 548 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 RARRES2Q99969 163 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 RALGAPA1Q6GYQ0 2036 aa13.61□□□□□ -0.23
PCDHA3-201ENST00000522353 POLEQ07864 2286 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 DIDO1Q9BTC0 2240 aaKnown RBP13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF236Q9UL36 1845 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 SAA2-SAA4A0A096LPE2 208 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 SAA2P0DJI9 122 aaPredicted RBP13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 TRBV6-7A0A0A0MS04 114 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 IGKV3OR2-268A0A0C4DH90 116 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 TCRBV4S1A1TA0A5B7 111 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 SAA1P0DJI8 122 aaPredicted RBP13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 TMEM101Q96IK0 257 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 VENTXO95231 258 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 COL5A1-AS1Q5SY13 56 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 OR11H4Q8NGC9 324 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 LINC01587Q99440 93 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 ARID2Q68CP9 1835 aa13.6□□□□□ -0.23
PCDHA3-201ENST00000522353 ABCA1O95477 2261 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 FBLL1A6NHQ2 334 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 UPK2O00526 184 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF25P17030 456 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 CCL1P22362 96 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 FAM166AQ6J272 317 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 OR52E5Q8NH55 327 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 NHLRC3Q5JS37 347 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 C12orf54Q6X4T0 127 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 SLC25A28Q96A46 364 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 NEU1Q99519 415 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 TRBV20OR9-2A0A075B6H5 130 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 SRIP30626 198 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 SIPA1L1O43166 1804 aa13.59□□□□□ -0.23
PCDHA3-201ENST00000522353 OTOFQ9HC10 1997 aa13.58□□□□□ -0.23
PCDHA3-201ENST00000522353 SHISA3A0PJX4 238 aa13.58□□□□□ -0.23
PCDHA3-201ENST00000522353 FOLR2P14207 255 aa13.58□□□□□ -0.23
PCDHA3-201ENST00000522353 SFRP2Q96HF1 295 aa13.58□□□□□ -0.23
PCDHA3-201ENST00000522353 PAX1P15863 534 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 LGALS3P17931 250 aaKnown RBP13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 IGFBP3P17936 291 aaPredicted RBP13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 IGFBP2P18065 325 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 MORN2Q502X0 79 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 MEIG1Q5JSS6 88 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 GGNQ86UU5 652 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 CENPWQ5EE01 88 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 STHQ8IWL8 128 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 MDS2Q8NDY4 140 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 TRAV24A0A0B4J272 114 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 PRSS2P07478 247 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 PVRIGQ6DKI7 326 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 RCC1LQ96I51 464 aaKnown RBP13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 FBLN5Q9UBX5 448 aa13.58□□□□□ -0.24
PCDHA3-201ENST00000522353 PSME4Q14997 1843 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 LDLRAD2Q5SZI1 272 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 ZNF600Q6ZNG1 722 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 DUSP14O95147 198 aaKnown RBP13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 UQCRFS1P47985 274 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 HTN3P15516 51 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 ZNF497Q6ZNH5 498 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 M0R381 172 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 RHOGP84095 191 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 LRRC37A2A6NM11 1700 aa13.57□□□□□ -0.24
PCDHA3-201ENST00000522353 SRRM5B3KS81 715 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 TIMM23O14925 209 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 RALGAPA2Q2PPJ7 1873 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 HBBP68871 147 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 TMEM144Q7Z5S9 345 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 TMEM167AQ8TBQ9 72 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 MBD3L4A6NDZ8 208 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 MBD3L3A6NE82 208 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 MBD3L5A6NJ08 208 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 OOSP1A8MZH6 123 aa13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 MBD3L2Q8NHZ7 208 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-201ENST00000522353 ANKRD36A6QL64 1941 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms