RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 C17orf100A8MU93 164 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 HOXA5P20719 270 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 HOXA4Q00056 320 aaPredicted RBP9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 RPP25LQ8N5L8 163 aaKnown RBP9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 RRHO14718 337 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 NDUFA2O43678 99 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 REG1AP05451 166 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 CCL3L1P16619 93 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 IGFBP2P18065 325 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 CRYBB3P26998 211 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 TMEM186Q96B77 213 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 LINC00473A8K010 186 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 STXBP6Q8NFX7 210 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 OR51G1Q8NGK1 321 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 RBFOX2O43251 390 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 VENTXO95231 258 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 TMEM14EPQ6UXP3 125 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 MMD2Q8IY49 270 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 VKORC1Q9BQB6 163 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 SRD5A3Q9H8P0 318 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 DNAJC4Q9NNZ3 241 aa9.36□□□□□ -0.91
PCDHGB4-201ENST00000519479 COL6A3P12111 3177 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 A0A1B0GW64 132 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 IGHV1-46P01743 117 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 C8orf88P0DMB2 117 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 SELENOTP62341 195 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 LEMD1Q68G75 181 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 NPIPB3Q92617 1050 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 PARD6GQ9BYG4 376 aaPredicted RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 ELOBQ15370 118 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 MRPL20Q9BYC9 149 aaKnown RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 FGF23Q9GZV9 251 aaPredicted RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 DIRC3C9JPN6 131 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 UBE2CO00762 179 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 RPL23P62829 140 aaKnown RBP9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 Q8NFD4 153 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 WDR83OSQ9Y284 106 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 RNF115Q9Y4L5 304 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
PCDHGB4-201ENST00000519479 WNK2Q9Y3S1 2297 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 HYPMO75409 117 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 HIST1H1BP16401 226 aaKnown RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 HEPN1Q6WQI6 88 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 OR8I2Q8N0Y5 310 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 SFRP2Q96HF1 295 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 TNFRSF19Q9NS68 423 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 IGKV1D-17A0A075B6S4 117 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 C15orf61A6NNL5 157 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 C1QTNF9BB2RNN3 333 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 GNG7O60262 68 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 TIMP3P35625 211 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 PAX9P55771 341 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 HSPB9Q9BQS6 159 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 THYN1Q9P016 225 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 CGAP01215 116 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 CD99P14209 185 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 GATA2P23769 480 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 ADAMTS9Q9P2N4 1935 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 TNRC18O15417 2968 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 COX19Q49B96 90 aa9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 ZNF474Q6S9Z5 364 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB4-201ENST00000519479 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 SH2D7A6NKC9 451 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 PPIAL4GP0DN37 164 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 ERVFRD-1P60508 538 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 OTOGLQ3ZCN5 2332 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 MUC15Q8N387 334 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 BMPR1BO00238 502 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 FOLR2P14207 255 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 FXYD3Q14802 87 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 IBA57Q5T440 356 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms