RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 KLK9Q2XQG4 91 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 TMEM128Q5BJH2 165 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 CTRB2Q6GPI1 263 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 CENPSQ8N2Z9 138 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 OR4A5Q8NH83 315 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 RBPMSQ93062 196 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 USMG5Q96IX5 58 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 NUDT15Q9NV35 164 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 KLK9Q9UKQ9 250 aa6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 ZNF256Q9Y2P7 627 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-213ENST00000509357 TRBV9A0A0B4J1U6 114 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 PITX3O75364 302 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 ADAP1O75689 374 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 SERPINE2P07093 398 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 CRYGCP07315 174 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 INPP1P49441 399 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 RHOGP84095 191 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 ATP5G2Q06055 141 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 TRIM16LQ309B1 348 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 SGPP2Q8IWX5 399 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 TTC9CQ8N5M4 171 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 B9D2Q9BPU9 175 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 PEF1Q9UBV8 284 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 OR51B2Q9Y5P1 312 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 S4R3C0 116 aa6.71□□□□□ -1.34
PDLIM5-213ENST00000509357 IGLV11-55A0A075B6I3 123 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 FAM223BA6NKX1 122 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 NPIPB5A8MRT5 1133 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 OR2J3O76001 311 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 NDUFB8O95169 186 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 DHFRP00374 187 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 FGF2P09038 288 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 VAMP1P23763 118 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 PSMB6P28072 239 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 S100GP29377 79 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 MAS1LP35410 378 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 SYNJ2BPP57105 145 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 ERVK-16P61578 105 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 EXOSC2Q13868 293 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 H2BFWTQ7Z2G1 175 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 LYG2Q86SG7 212 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 FAM223AQ8IWN6 122 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 DUSP18Q8NEJ0 188 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 IL22RA2Q969J5 263 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 CACNG5Q9UF02 275 aa6.7□□□□□ -1.34
PDLIM5-213ENST00000509357 A0A0B4J2A0 478 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 MFSD2BA6NFX1 497 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 CCSO14618 274 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 BRI3O95415 125 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 IGHV3-23P01764 117 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 HLA-AP01891 365 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 DEFA4P12838 97 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 EDN2P20800 178 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 AKR1C2P52895 323 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 PRCDQ00LT1 54 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 BSXQ3C1V8 233 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 GGNBP1Q5YKI7 109 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 PVRIGQ6DKI7 326 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 ZNF343Q6P1L6 599 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 HAPLN4Q86UW8 402 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 NECAP1Q8NC96 275 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 OR1L8Q8NGR8 309 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 LSM10Q969L4 123 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 OR10C1Q96KK4 312 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 ASCL2Q99929 193 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 COMMD5Q9GZQ3 224 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 MRPL36Q9P0J6 103 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 SHPKQ9UHJ6 478 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
PDLIM5-213ENST00000509357 IGHV3-21A0A0B4J1V1 117 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 FAM240BA0A1B0GVZ2 78 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 CENPXA8MT69 81 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 K7EIM0 57 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 B3GALNT1O75752 331 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 HOXB5P09067 269 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 NHLRC4P0CG21 123 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 TRAPPC2P0DI81 140 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 TRAPPC2BP0DI82 140 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 RNASE2P10153 161 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 GP9P14770 177 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 HSPE1P61604 102 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 KLF5Q13887 457 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 C15orf32Q32M92 178 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 LGI3Q8N145 548 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 OR2C3Q8N628 320 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 MITD1Q8WV92 249 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 SCGB3A2Q96PL1 93 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 MARVELD1Q9BSK0 173 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 HINT2Q9BX68 163 aa6.68□□□□□ -1.34
PDLIM5-213ENST00000509357 PEMTQ9UBM1 199 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms