RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SERTM2A0A1B0GWG4 89 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PRE2 83 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 AMY1AP04745 511 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 GCHFRP30047 84 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 CNN3Q15417 329 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 OR8B8Q15620 311 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 CEACAM16Q2WEN9 425 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 C12orf54Q6X4T0 127 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 ADAMTSL5Q6ZMM2 481 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 BPIFA4PQ86YQ2 179 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 HSD17B10Q99714 261 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 GEMIN7Q9H840 131 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 JKAMPQ9P055 326 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 METRNQ9UJH8 293 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 IGHV1-24A0A0C4DH33 117 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PRD5 423 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PRF3 423 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PRM7 423 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 CDIPTO14735 213 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 TLX3O43711 291 aaPredicted RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 GCSHP23434 173 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 FOXG1P55316 489 aaPredicted RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 GNG5P63218 68 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 IGLV3-21P80748 117 aaPredicted RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 RUNX3Q13761 415 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 TIGITQ495A1 244 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 MBNL2Q5VZF2 373 aaKnown RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 ZNF776Q68DI1 518 aaPredicted RBP6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 CFAP161Q6P656 301 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 DHRS13Q6UX07 377 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 PCP2Q8IVA1 136 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 Q8N7P7 452 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 NABP1Q96AH0 204 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 MGST2Q99735 147 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 COMMD5Q9GZQ3 224 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 CACNA1EQ15878 2313 aa6.01□□□□□ -1.45
LIMCH1-207ENST00000508466 TRAV24A0A0B4J272 114 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 PMS2P5A8MQ11 134 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 P04436 131 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 C3AR1Q16581 482 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TBR1Q16650 682 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 OR10J3Q5JRS4 329 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 NUP35Q8NFH5 326 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 SLC25A40Q8TBP6 338 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 GUCD1Q96NT3 240 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 PLEKHA3Q9HB20 300 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 PROK2Q9HC23 129 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 HES4Q9HCC6 221 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TMEM140Q9NV12 185 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 OR51B2Q9Y5P1 312 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 LRRC30A6NM36 301 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 HIGD1CA8MV81 97 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 H3BMG7 143 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TRAPPC2LH3BP13 241 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TRIP6Q15654 476 aaKnown RBP6□□□□□ -1.45
LIMCH1-207ENST00000508466 WIPI1Q5MNZ9 446 aaPredicted RBP6□□□□□ -1.45
LIMCH1-207ENST00000508466 MORN5Q5VZ52 161 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TREML4Q6UXN2 200 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 LHFPL2Q6ZUX7 228 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 H2BFWTQ7Z2G1 175 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM169BQ8N8A8 192 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 OXGR1Q96P68 337 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 TMUB1Q9BVT8 246 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 NAV3Q8IVL0 2385 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 ADGRG4Q8IZF6 3080 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 F2RL2O00254 374 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 CYC1P08574 325 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 BRWD1-AS2P59051 145 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 EFNB3Q15768 340 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 PRAMEF5Q5TYX0 476 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 PRAMEF6Q5VXH4 476 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 LYSMD4Q5XG99 296 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 UFSP1Q6NVU6 142 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 LEAP2Q969E1 77 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 C5orf30Q96GV9 206 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 C20orf78Q9BR46 151 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 ST20Q9HBF5 79 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 GVINP1Q7Z2Y8 2422 aa6□□□□□ -1.45
LIMCH1-207ENST00000508466 C15orf62A8K5M9 175 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 TGFAP01135 160 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 SRFP11831 508 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 CFHR2P36980 270 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 HCFC1P51610 2035 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 YRDCQ86U90 279 aaKnown RBP5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 CPAMD8Q8IZJ3 1885 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM173AQ9BQD7 235 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 CFHR5Q9BXR6 569 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 SCRT2Q9NQ03 307 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 AGRNO00468 2067 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A0G2JMM0 328 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PPB8 328 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 LINC00473A8K010 186 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 KIR3DP1A8MWS1 328 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 B5MCH6 92 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms