RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 C1orf158Q8N1D5 194 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 TMEM86AQ8N2M4 240 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 SLC22A24Q8N4F4 322 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 DEFB125Q8N687 156 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 MCFD2Q8NI22 146 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 DGCR14Q96DF8 476 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 CNBD2Q96M20 576 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 PPP1R2P1Q96PQ5 205 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 ULBP3Q9BZM4 244 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 OR51V1Q9H2C8 321 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 CISHQ9NSE2 258 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 VPS29Q9UBQ0 182 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 RSL24D1Q9UHA3 163 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 PRELID1Q9Y255 219 aa0.68□□□□□ -2.3
UBE2D3-218ENST00000505009 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 SCN9AQ15858 1988 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 A0A087WUJ7 227 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAV38-1A0A0B4J264 116 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 FAM236DA0A1B0GTK5 79 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 TMEM114B3SHH9 223 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 EEF1E1-BLOC1S5C9J1V9 151 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 H3BT86 120 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 I3L521 148 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 KPNA3O00505 521 aaPredicted RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 SLC22A1O15245 554 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 NSA2O95478 260 aaKnown RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 CRYZL1O95825 349 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 FAM236CP0DP71 79 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 FGF6P10767 208 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 NFYAP23511 347 aaPredicted RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 CAPZBP47756 277 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 AQP4P55087 323 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 OR4D2P58180 307 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 RPS20P60866 119 aaKnown RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 RAB14P61106 215 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 MRPS15P82914 257 aaKnown RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 REEP5Q00765 189 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 AESQ08117 197 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 TMED2Q15363 201 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 DEFB115Q30KQ5 88 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 ARHGAP11BQ3KRB8 267 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 LPCAT3Q6P1A2 487 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 SSX8Q7RTT4 187 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 C20orf196Q8IYI0 205 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 KRT222Q8N1A0 295 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 LRRC25Q8N386 305 aaPredicted RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 RPP25LQ8N5L8 163 aaKnown RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 ANKRD29Q8N6D5 301 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 RASSF5Q8WWW0 418 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 ANKRD7Q92527 254 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 SLC35B4Q969S0 331 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 CHMP6Q96FZ7 201 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 BTF3L4Q96K17 158 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 ODF3Q96PU9 254 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 TRIM4Q9C037 500 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 OR8D2Q9GZM6 311 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 PRTFDC1Q9NRG1 225 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 PAQR5Q9NXK6 330 aaPredicted RBP0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 MAST2Q6P0Q8 1798 aa0.67□□□□□ -2.3
UBE2D3-218ENST00000505009 SIPA1L1O43166 1804 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 DCCP43146 1447 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 NCOA1Q15788 1441 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 TRBV20OR9-2A0A075B6H5 130 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 TRAV9-1A0A075B6T8 112 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 PQLC2LA1A4F0 135 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 IRGMA1A4Y4 181 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 GGT3PA6NGU5 568 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CLDN24A6NM45 220 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 PIRO00625 290 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 HLA-DRB1P01911 266 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 C1QAP02745 245 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 MSMBP08118 114 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 LGALS1P09382 135 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 SULT1A3P0DMM9 295 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 SULT1A4P0DMN0 295 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 NEFHP12036 1026 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 RPL28P46779 137 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 AP3S2P59780 193 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 FADDQ13158 208 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 SRSF6Q13247 344 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 PMAIP1Q13794 54 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 EDDM3AQ14507 147 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 RPL22L1Q6P5R6 122 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 Q6ZS49 121 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 LINC00471Q8N535 108 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CLDN22Q8N7P3 220 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 ZNF676Q8N7Q3 588 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 OR52R1Q8NGF1 315 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CDC26Q8NHZ8 85 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 MRPL30Q8TCC3 161 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 BORCS7Q96B45 105 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 WDR61Q9GZS3 305 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CCDC90BQ9GZT6 254 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CHST6Q9GZX3 395 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 RNASE7Q9H1E1 156 aaKnown RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 EFCAB1Q9HAE3 211 aa0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.66□□□□□ -2.3
UBE2D3-218ENST00000505009 IDI2-AS1Q9NZ38 188 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms