RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SOX21Q9Y651 276 aaPredicted RBP13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 RNASEH2CQ8TDP1 164 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 RNASE6Q93091 150 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 LOC107984156A0A0G2JMH3 177 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 TAS2R60P59551 318 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 ARL17AQ8IVW1 177 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 EEF1AKMT3Q96AZ1 226 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 EFNA2O43921 213 aa13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 TBL2Q9Y4P3 447 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-202ENST00000503427 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 CRXO43186 299 aaPredicted RBP13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 CELA3BP08861 270 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 CTAG1AP78358 180 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 FAM216BQ8N7L0 139 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 OR4D5Q8NGN0 318 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 CCL19Q99731 98 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 DCTN5Q9BTE1 182 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 SPRR3Q9UBC9 169 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 CLPSP04118 112 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 TMEM144Q7Z5S9 345 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 ZNF497Q6ZNH5 498 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 MIEN1Q9BRT3 115 aa13.54□□□□□ -0.24
HMGXB3-202ENST00000503427 YPEL1O60688 119 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 GPX1P07203 203 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 LHFPL1Q86WI0 220 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 OR52E5Q8NH55 327 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 YPEL2Q96QA6 119 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 LEMD1Q68G75 181 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 MIR17HGQ75NE6 70 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 GGNQ86UU5 652 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 LINC00312Q9Y6C7 94 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 TCF20Q9UGU0 1960 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 KIF26BQ2KJY2 2108 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 IGKV1D-8A0A087WSZ0 117 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 RBFOX2O43251 390 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 FMC1Q96HJ9 113 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 GPR82Q96P67 336 aa13.53□□□□□ -0.24
HMGXB3-202ENST00000503427 CRYGSP22914 178 aa13.52□□□□□ -0.24
HMGXB3-202ENST00000503427 FAM201AQ5SY85 155 aa13.52□□□□□ -0.24
HMGXB3-202ENST00000503427 DPM3Q9P2X0 92 aa13.52□□□□□ -0.24
HMGXB3-202ENST00000503427 C7orf71A4D174 169 aa13.52□□□□□ -0.24
HMGXB3-202ENST00000503427 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.24
HMGXB3-202ENST00000503427 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 C19orf67A6NJJ6 358 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 E9PLN8 166 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 LDLRAD4O15165 306 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 HERPUD1Q15011 391 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 VKORC1Q9BQB6 163 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 CACNA1HO95180 2353 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 A0A1B0GUT8 65 aa13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 SRSF7Q16629 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 ZNF256Q9Y2P7 627 aaPredicted RBP13.52□□□□□ -0.25
HMGXB3-202ENST00000503427 DLX6P56179 175 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 TMEM136Q6ZRR5 245 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 FBXL15Q9H469 300 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 IZUMO1RA6ND01 250 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 MRPL20Q9BYC9 149 aaKnown RBP13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 A0A1B0GW15 77 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 FOXI3A8MTJ6 420 aaPredicted RBP13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 CD5P06127 495 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 CCL20P78556 96 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 ZNF324BQ6AW86 544 aaPredicted RBP13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 DDB2Q92466 427 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 A1L4Q6 167 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 RTN4RL2Q86UN3 420 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 WNT10AQ9GZT5 417 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 WFDC1Q9HC57 220 aa13.51□□□□□ -0.25
HMGXB3-202ENST00000503427 LGALS3P17931 250 aaKnown RBP13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 TSPOP30536 169 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 TIMP3P35625 211 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 Q6AWC8 147 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 PRELID3AQ96N28 172 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 UPK2O00526 184 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 MBD3L1Q8WWY6 194 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 RNFT1Q5M7Z0 435 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 KIR2DL4Q99706 377 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 CHODLQ9H9P2 273 aa13.5□□□□□ -0.25
HMGXB3-202ENST00000503427 PEF1Q9UBV8 284 aaKnown RBP13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 MORN2Q502X0 79 aa13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 FAM166AQ6J272 317 aa13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 WDR82Q6UXN9 313 aa13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 CIARTQ8N365 385 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms