RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SLC25A22Q9H936 323 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 UBTD1Q9HAC8 227 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 PATZ1Q9HBE1 687 aaKnown RBP5.64□□□□□ -1.51
USP39-219ENST00000496047 RPRMQ9NS64 109 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 INSIG2Q9Y5U4 225 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 ROS1P08922 2347 aa5.64□□□□□ -1.51
USP39-219ENST00000496047 CELSR3Q9NYQ7 3312 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 HIVEP3Q5T1R4 2406 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 ANKHD1Q8IWZ3 2542 aaKnown RBP5.63□□□□□ -1.51
USP39-219ENST00000496047 LOC105371242A0A075B767 164 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 INS-IGF2F8WCM5 200 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 IGLV1-40P01703 118 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 SNRNP70P08621 437 aaKnown RBP5.63□□□□□ -1.51
USP39-219ENST00000496047 SRP19P09132 144 aaKnown RBP5.63□□□□□ -1.51
USP39-219ENST00000496047 OR13C7P0DN81 318 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 COL8A2P25067 703 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 NPBWR1P48145 328 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 DLX6P56179 175 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 LINC00205P59089 165 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 TAS2R45P59539 299 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 B2MP61769 119 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 RHOBP62745 196 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 TFF3Q07654 80 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 PMS2P11Q13670 270 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 PLGLAQ15195 96 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 ANKRD39Q53RE8 183 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 CCDC144NLQ6NUI1 221 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 MOB3BQ86TA1 216 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 KIR3DL3Q8N743 410 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 TEX45Q8NA69 505 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 RNASEH2CQ8TDP1 164 aaKnown RBP5.63□□□□□ -1.51
USP39-219ENST00000496047 RNF5Q99942 180 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 C19orf24Q9BVV8 132 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 MLXQ9UH92 298 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 PXMP4Q9Y6I8 212 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 RELNP78509 3460 aa5.63□□□□□ -1.51
USP39-219ENST00000496047 TRAV3A0A0B4J244 114 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 TEX50A0A1B0GTY4 177 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 SEC14L6B5MCN3 397 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 FAM157AC9JC47 383 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 F6UZH7 168 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 DNASE2O00115 360 aaPredicted RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 SCGB2A1O75556 95 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 CXorf1O96002 111 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 CA2P00918 260 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 GNLYP22749 145 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 COX7A1P24310 79 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 PAX6P26367 422 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 HTR1DP28221 377 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 RPL27AP46776 148 aaKnown RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 RPL29P47914 159 aaKnown RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 REG1BP48304 166 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 BPIFB3P59826 476 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 MEF2BQ02080 365 aaPredicted RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 ICAM4Q14773 271 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 ACSM6Q6P461 480 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 TMEM144Q7Z5S9 345 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 SLC35E3Q7Z769 313 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 ITLN2Q8WWU7 325 aaPredicted RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 CACNG8Q8WXS5 425 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 SIRT7Q9NRC8 400 aa5.62□□□□□ -1.51
USP39-219ENST00000496047 PUS1Q9Y606 427 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP39-219ENST00000496047 TLN1Q9Y490 2541 aaKnown RBP5.62□□□□□ -1.51
USP39-219ENST00000496047 COL12A1Q99715 3063 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 A0A087WWC5 75 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 IGHV1-3A0A0C4DH29 117 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 A6NNC1 897 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 OOSP1A8MZH6 123 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 LYNX1G3V0Z9 82 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 BUB1B-PAK6H3BSN5 160 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 RRHO14718 337 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 NUPL2O15504 423 aaKnown RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 SLC25A17O43808 307 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 PDE6DO43924 150 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 POLQO75417 2590 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 IGKV1-16P04430 117 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 IL6RP08887 468 aaPredicted RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 LYNX1P0DP58 116 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 GPX4P36969 197 aaPredicted RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 PDLIM4P50479 330 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 EFNA4P52798 201 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 FGF8P55075 233 aaPredicted RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 LGALS4P56470 323 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 RAB5BP61020 215 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 FLI1Q01543 452 aaPredicted RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 CD69Q07108 199 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 TNXAQ16473 311 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 TMEM249Q2WGJ8 235 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 TMEM88Q6PEY1 159 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 ATRAIDQ6UW56 229 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 ZNF841Q6ZN19 808 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 SLC16A13Q7RTY0 426 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 PNKDQ8N490 385 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 CYB561D1Q8N8Q1 229 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 OR1L6Q8NGR2 347 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 OR1L4Q8NGR5 311 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 ST6GALNAC6Q969X2 333 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms