RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 ZNF257Q9Y2Q1 563 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 OR51B2Q9Y5P1 312 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 PDE6DO43924 150 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 PPBPP02775 128 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 TRGC2P03986 189 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 SLAQ13239 276 aa12.09□□□□□ -0.47
CHTOP-206ENST00000495554 PATZ1Q9HBE1 687 aaKnown RBP12.09□□□□□ -0.47
CHTOP-206ENST00000495554 PPIAL4EA0A075B759 164 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 PPIAL4DF5H284 164 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 PPIAL4FP0DN26 164 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 HOXA5P20719 270 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 RBPJQ06330 500 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 ARSJQ5FYB0 599 aaPredicted RBP12.08□□□□□ -0.48
CHTOP-206ENST00000495554 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 DOK5Q9P104 306 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 PPIAL4AQ9Y536 164 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 RELNP78509 3460 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 SPTA1P02549 2419 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 TMEM178BH3BS89 294 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 J3QR06 171 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 UPK2O00526 184 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 VENTXO95231 258 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 CA2P00918 260 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 RAB31Q13636 194 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 NDUFAF3Q9BU61 184 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 CSTL1Q9H114 145 aa12.08□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
CHTOP-206ENST00000495554 ZNF833PQ6ZTB9 187 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 C1orf159Q96HA4 380 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 PLEKHA3Q9HB20 300 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 NGBQ9NPG2 151 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 TET2Q6N021 2002 aaPredicted RBP12.07□□□□□ -0.48
CHTOP-206ENST00000495554 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 FNDC10F2Z333 226 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 STAG3L2P0CL84 134 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 NDUFA6P56556 154 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 UBE2G2P60604 165 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 PRCDQ00LT1 54 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 C16orf82Q7Z2V1 217 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 TXNDC17Q9BRA2 123 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 FKBP11Q9NYL4 201 aa12.07□□□□□ -0.48
CHTOP-206ENST00000495554 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 FCN3O75636 299 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 CXorf1O96002 111 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 CCL17Q92583 94 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 ZNRD1Q9P1U0 126 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 E7EQL1 145 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 H7BYZ3 331 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 PFN1P07737 140 aaKnown RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 NPPCP23582 126 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 RPL29P47914 159 aaKnown RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 OSR1Q8TAX0 266 aaPredicted RBP12.06□□□□□ -0.48
CHTOP-206ENST00000495554 SSMEM1Q8WWF3 244 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 TMEM106BQ9NUM4 274 aa12.06□□□□□ -0.48
CHTOP-206ENST00000495554 F6UZH7 168 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 MYOD1P15172 320 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 OR51G1Q8NGK1 321 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 RNASE6Q93091 150 aaKnown RBP12.05□□□□□ -0.48
CHTOP-206ENST00000495554 OR5B12Q96R08 314 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 NDUFB3O43676 98 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 APOA2P02652 100 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 CCL3L1P16619 93 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 UCNP55089 124 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 GAMTQ14353 236 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 STPG3Q8N7X2 389 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 ZNF596Q8TC21 504 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 PYGO2Q9BRQ0 406 aa12.05□□□□□ -0.48
CHTOP-206ENST00000495554 TEX50A0A1B0GTY4 177 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 CBY3A6NI87 242 aa12.04□□□□□ -0.48
CHTOP-206ENST00000495554 TNFRSF13BO14836 293 aaPredicted RBP12.04□□□□□ -0.48
CHTOP-206ENST00000495554 ATP5G3P48201 142 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms