RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 K7EIM0 57 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 CD5P06127 495 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 CTSGP08311 255 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 TBCEQ15813 527 aaPredicted RBP10.41□□□□□ -0.74
VARS-228ENST00000495010 ZNF818PQ6ZRF7 136 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
VARS-228ENST00000495010 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 C15orf61A6NNL5 157 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 F8W735 103 aaPredicted RBP10.4□□□□□ -0.74
VARS-228ENST00000495010 MED14OSP0DP75 135 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 MFAP4P55083 255 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 AQP4P55087 323 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 HERV-K104P61576 105 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 RPL11P62913 178 aaKnown RBP10.4□□□□□ -0.74
VARS-228ENST00000495010 LEMD1Q68G75 181 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 ZNF773Q6PK81 442 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 TCF24Q7RTU0 167 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 HOGA1Q86XE5 327 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 STHQ8IWL8 128 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 SLC25A46Q96AG3 418 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 MISP3Q96FF7 219 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 GINS3Q9BRX5 216 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 HRH4Q9H3N8 390 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 FKBP11Q9NYL4 201 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
VARS-228ENST00000495010 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
VARS-228ENST00000495010 TRAV18A0A075B6X5 111 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 TRAV10A0A0B4J240 114 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 ST8SIA3O43173 380 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 DFFBO76075 338 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 KRASP01116 189 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 FCER2P06734 321 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 DEFB131AP59861 70 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 TPRA1Q86W33 373 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 GIMAP1Q8WWP7 306 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 DGCR14Q96DF8 476 aaKnown RBP10.39□□□□□ -0.75
VARS-228ENST00000495010 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 TXN2Q99757 166 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 RHBDL2Q9NX52 303 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 BLOC1S6Q9UL45 172 aa10.39□□□□□ -0.75
VARS-228ENST00000495010 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 GNG7O60262 68 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 RLN1P04808 185 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 F2RP25116 425 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 LPAR6P43657 344 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 FAM90A2PQ658T7 463 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 DUSP18Q8NEJ0 188 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 OR1P1Q8NH06 330 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 NXF2Q9GZY0 626 aaKnown RBP10.38□□□□□ -0.75
VARS-228ENST00000495010 HECTD4Q9Y4D8 3996 aa10.38□□□□□ -0.75
VARS-228ENST00000495010 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 MIFP14174 115 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 G6PCP35575 357 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 CBX5P45973 191 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 PVRIGQ6DKI7 326 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 SFXN4Q6P4A7 337 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 Q8NAQ8 132 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 OR5AP2Q8NGF4 316 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 TSC22D3Q99576 134 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 MS4A6AQ9H2W1 248 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 TXNL4BQ9NX01 149 aaKnown RBP10.37□□□□□ -0.75
VARS-228ENST00000495010 RABAC1Q9UI14 185 aa10.37□□□□□ -0.75
VARS-228ENST00000495010 PGLYRP1O75594 196 aaPredicted RBP10.36□□□□□ -0.75
VARS-228ENST00000495010 GNRHRP30968 328 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 Q6ZTC4 211 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 CMTM1Q8IZ96 169 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 FCAMRQ8WWV6 532 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 PINX1Q96BK5 328 aaKnown RBP10.36□□□□□ -0.75
VARS-228ENST00000495010 RNF126Q9BV68 326 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 TMEM231Q9H6L2 316 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 DIABLOQ9NR28 239 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 EHFQ9NZC4 300 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 PCLOQ9Y6V0 5065 aa10.36□□□□□ -0.75
VARS-228ENST00000495010 KIAA1109Q2LD37 5005 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 IGHV3-66A0A0C4DH42 116 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 I3L2K1 104 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 MT-CO2P00403 227 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 IGHV3-48P01763 117 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
VARS-228ENST00000495010 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 FGF9P31371 208 aaPredicted RBP10.35□□□□□ -0.75
VARS-228ENST00000495010 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
VARS-228ENST00000495010 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
VARS-228ENST00000495010 CADM3Q8N126 398 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 MOB3AQ96BX8 217 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 SSR3Q9UNL2 185 aa10.35□□□□□ -0.75
VARS-228ENST00000495010 A0A0A6YYH2 397 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 MEIS3P1A6NDR6 274 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 A6NJ64 397 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms