RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PRSS48Q7RTY5 328 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
NUP50-218ENST00000493456 TRAV14DV4A0A0A6YYC5 116 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 TMEM41BQ5BJD5 291 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 PVRIGQ6DKI7 326 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
NUP50-218ENST00000493456 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
NUP50-218ENST00000493456 PRSS29PA6NIE9 313 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 YIF1AO95070 293 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 MIFP14174 115 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 NDUFB11Q9NX14 153 aa12.84□□□□□ -0.35
NUP50-218ENST00000493456 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 TRAV2A0A0B4J234 112 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 IGHV4-28A0A0C4DH34 117 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 TRDV1A0A1B0GX56 115 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 EIF4EP06730 217 aaKnown RBP12.83□□□□□ -0.36
NUP50-218ENST00000493456 TBCEQ15813 527 aaPredicted RBP12.83□□□□□ -0.36
NUP50-218ENST00000493456 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 Q6ZTC4 211 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 TCF24Q7RTU0 167 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 ZNF367Q7RTV3 350 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 STHQ8IWL8 128 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 CADM3Q8N126 398 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 OR1P1Q8NH06 330 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 BORCS5Q969J3 196 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 HINT2Q9BX68 163 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 HSPG2P98160 4391 aa12.83□□□□□ -0.36
NUP50-218ENST00000493456 MUC4Q99102 2169 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 NOTOA8MTQ0 251 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
NUP50-218ENST00000493456 EBAG9O00559 213 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 AMBPP02760 352 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
NUP50-218ENST00000493456 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 P0DMU3 169 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 FAM231AP0DMU4 169 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 FAM231CP0DMU5 169 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 FXYD4P59646 89 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 DEFB131AP59861 70 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
NUP50-218ENST00000493456 TXN2Q99757 166 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 GINS3Q9BRX5 216 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 NXF2Q9GZY0 626 aaKnown RBP12.82□□□□□ -0.36
NUP50-218ENST00000493456 OR51B2Q9Y5P1 312 aa12.82□□□□□ -0.36
NUP50-218ENST00000493456 MFAP4P55083 255 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 C22orf42Q6IC83 251 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 POM121L12Q8N7R1 296 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 MS4A6AQ9H2W1 248 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 VSIRQ9H7M9 311 aa12.81□□□□□ -0.36
NUP50-218ENST00000493456 IGHV3OR16-13A0A075B7E8 117 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 IGHV3-74A0A0B4J1X5 117 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 SMIM30A4D0T7 59 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 ZNF705EA8MWA4 302 aaPredicted RBP12.8□□□□□ -0.36
NUP50-218ENST00000493456 RTL8CO15255 209 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 SNAPC5O75971 98 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 SPP1P10451 314 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 PTHLHP12272 177 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 MORN3Q6PF18 240 aaPredicted RBP12.8□□□□□ -0.36
NUP50-218ENST00000493456 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
NUP50-218ENST00000493456 I3L2K1 104 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 F2RP25116 425 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 RHBDL2Q9NX52 303 aa12.79□□□□□ -0.36
NUP50-218ENST00000493456 GIG44P09565 113 aaPredicted RBP12.78□□□□□ -0.36
NUP50-218ENST00000493456 HERV-K104P61576 105 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
NUP50-218ENST00000493456 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 MISP3Q96FF7 219 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 DAPK2Q9UIK4 370 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
NUP50-218ENST00000493456 ELOA3CA0A087WX78 387 aaPredicted RBP12.77□□□□□ -0.37
NUP50-218ENST00000493456 DEFB131BA0A096LNP1 70 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 GNG7O60262 68 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 KRASP01116 189 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 RLN1P04808 185 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 GNRHRP30968 328 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 RPL11P62913 178 aaKnown RBP12.77□□□□□ -0.37
NUP50-218ENST00000493456 LGALS9BQ3B8N2 356 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 TPRA1Q86W33 373 aa12.77□□□□□ -0.37
NUP50-218ENST00000493456 FAM24BQ8N5W8 94 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms