RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MAGEA3P43357 314 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 TSPAN5P62079 268 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 FUT5Q11128 374 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 HES1Q14469 280 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 ACSBG2Q5FVE4 666 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 MED27Q6P2C8 311 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 PRSS54Q6PEW0 395 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 HMGN2P46Q86SG4 172 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 PHF13Q86YI8 300 aaPredicted RBP2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 RNF182Q8N6D2 247 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 OR11H1Q8NG94 326 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 BLNKQ8WV28 456 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 TNFRSF14Q92956 283 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 SPACA5Q96QH8 159 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 OR2A7Q96R45 310 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 CYB5R1Q9UHQ9 305 aa2.76□□□□□ -1.97
SSX2IP-208ENST00000490476 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 VGLL3A8MV65 326 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 NQO2P16083 231 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 SLC18A1P54219 525 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 PSPHP78330 225 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 ATP5G2Q06055 141 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 TRAM1Q15629 374 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 USF2Q15853 346 aaPredicted RBP2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 FAM231DQ6ZW35 169 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 CYP4Z1Q86W10 505 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 MIR7-3HGQ8N6C7 128 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 SLC35G3Q8N808 338 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 OR52R1Q8NGF1 315 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 OR2AE1Q8NHA4 323 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 NELFBQ8WX92 580 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 RMI2Q96E14 147 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 ZHX1-C8orf76Q96EF9 292 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 ATP6V1G3Q96LB4 118 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 ZNF2Q9BSG1 426 aaPredicted RBP2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 MS4A8Q9BY19 250 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 SLC19A3Q9BZV2 496 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 NDEL1Q9GZM8 345 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 NXF2Q9GZY0 626 aaKnown RBP2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 OR2S2Q9NQN1 319 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 MS4A12Q9NXJ0 267 aa2.75□□□□□ -1.97
SSX2IP-208ENST00000490476 LOC389332A0A1B0GUA5 103 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 OR7C2O60412 319 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 TNFAIP8O95379 198 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 CXorf1O96002 111 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 IFNA5P01569 189 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 SSR2P43308 183 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 KCNJ3P48549 501 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 PMS2P3Q13401 168 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 CEACAM16Q2WEN9 425 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 SP6Q3SY56 376 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 ATP6AP1LQ52LC2 224 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 FAM201AQ5SY85 155 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 C3orf33Q6P1S2 294 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 ZNF773Q6PK81 442 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 TMPPEQ6ZT21 453 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 LRRC6Q86X45 466 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 SELENOHQ8IZQ5 122 aaKnown RBP2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 ST20-AS1Q8NBB2 130 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 C4orf3Q8WVX3 66 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 OR5P2Q8WZ92 322 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 OR4C12Q96R67 309 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 SRRQ9GZT4 340 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 LINC00574Q9H8X3 128 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 ABCB9Q9NP78 766 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 PARP11Q9NR21 331 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 MAT2BQ9NZL9 334 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 HEY1Q9Y5J3 304 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
SSX2IP-208ENST00000490476 OR2AT4A6NND4 320 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 RGS5O15539 181 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 NDUFB2O95178 105 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 FSTL3O95633 263 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 NRASP01111 189 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 HRASP01112 189 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 KRASP01116 189 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 IFNA21P01568 189 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 IFNA17P01571 189 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 IGLV1-51P01701 117 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 SNRPAP09012 282 aaKnown RBP2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 CD79AP11912 226 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 CPMP14384 443 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 M6PRP20645 277 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 SYT1P21579 422 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 MPIP34949 423 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 OR2B6P58173 313 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 BNIP2Q12982 314 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 TPBGQ13641 420 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 EXOC3L4Q17RC7 722 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 UBE2NLQ5JXB2 153 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 ZNF678Q5SXM1 525 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 MORN3Q6PF18 240 aaPredicted RBP2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 AAED1Q7RTV5 226 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 LINC00596Q86U02 117 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 ZNF561Q8N587 486 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 OR52N1Q8NH53 320 aa2.73□□□□□ -1.97
SSX2IP-208ENST00000490476 FMC1Q96HJ9 113 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms