RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IGHV4-34P06331 123 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 TFPTP0C1Z6 253 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CTSEP14091 401 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CPMP14384 443 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 KLK2P20151 261 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 KDELR1P24390 212 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CA5AP35218 305 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NUDT1P36639 197 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 RAP1AP62834 184 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 GNA12Q03113 381 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CCDC153Q494R4 210 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ATP6AP1LQ52LC2 224 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 FAM78BQ5VT40 261 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NCBP2-AS2Q69YL0 99 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NANOGP8Q6NSW7 305 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 DCUN1D2Q6PH85 259 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NTM-AS1Q6ZSK4 140 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 FA2HQ7L5A8 372 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 DHFR2Q86XF0 187 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 KRTCAP2Q8N6L1 136 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 CD177Q8N6Q3 437 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 SLC25A29Q8N8R3 303 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 Q8N976 141 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 OR4A5Q8NH83 315 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 RHOXF1Q8NHV9 184 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 LMX1AQ8TE12 382 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ORAOV1Q8WV07 137 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 YPEL4Q96NS1 127 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF2Q9BSG1 426 aaPredicted RBP2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM147Q9BVK8 224 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 GTSF1LQ9H1H1 148 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 NANOGQ9H9S0 305 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 SLC23A2Q9UGH3 650 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PYCARDQ9ULZ3 195 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 ANGPT4Q9Y264 503 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 HS3ST2Q9Y278 367 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 WASHC3Q9Y3C0 194 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 PLXNB3Q9ULL4 1909 aa2.13□□□□□ -2.07
DEPDC1-204ENST00000489862 THADAQ6YHU6 1953 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 EPG5Q9HCE0 2579 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 BSNQ9UPA5 3926 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 TPRP12270 2363 aaKnown RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV5-51A0A0C4DH38 117 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV5-10-1A0A0J9YXX1 117 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 A0A1W2PRE2 83 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 FAM168BA1KXE4 195 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PRORSD1PA6NEY8 169 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 B4DEV8 164 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PPP5D1E7EU14 171 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 COPEO14579 308 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 OR7C2O60412 319 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PPBPP02775 128 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 OPN1SWP03999 348 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 OR12D1P0DN82 309 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF823P16415 610 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 RHOBP62745 196 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 GNB2P62879 340 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 SP6Q3SY56 376 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM78Q5T7P6 136 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 TEX36Q5VZQ5 186 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 GRINAQ7Z429 371 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF664Q8N3J9 261 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 C14orf178Q8N769 122 aaPredicted RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 Q8N7P7 452 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 TSTD1Q8NFU3 115 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 OR5K1Q8NHB7 308 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 RNASE6Q93091 150 aaKnown RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 MRPL48Q96GC5 212 aaKnown RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 OR7D2Q96RA2 312 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 KLF6Q99612 283 aaPredicted RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 ALX4Q9H161 411 aaPredicted RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 MED28Q9H204 178 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 UBQLN4Q9NRR5 601 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM216Q9P0N5 145 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 GSKIPQ9P0R6 139 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 RPS6KB2Q9UBS0 482 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 NUFIP1Q9UHK0 495 aaKnown RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PRNDQ9UKY0 176 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 SPENQ96T58 3664 aaKnown RBP2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 ASXL3Q9C0F0 2248 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PCDH15Q96QU1 1955 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 CEP192Q8TEP8 1941 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 PLXND1Q9Y4D7 1925 aa2.12□□□□□ -2.07
DEPDC1-204ENST00000489862 CHD6Q8TD26 2715 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 IGF2RP11717 2491 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 ATMQ13315 3056 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 hCG_1818297A0A087WSY0 165 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV3-66A0A0C4DH42 116 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CLDN25C9JDP6 229 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 F5H5P2 479 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CCNKO75909 580 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV3-11P01762 117 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 SCGB1C2P0DMR2 95 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 GABRA4P48169 554 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 GABARAPL2P60520 117 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 MAXP61244 160 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 HSPE1P61604 102 aaKnown RBP2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 LYZP61626 148 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 SNRPD2P62316 118 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms