RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 OR2T10Q8NGZ9 312 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 OR52E5Q8NH55 327 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 CMTM2Q8TAZ6 248 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 FGF13Q92913 245 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 UBE2E3Q969T4 207 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 TMEM230Q96A57 120 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 FAM3DQ96BQ1 224 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 MRAP2Q96G30 205 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF681Q96N22 645 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 HIST1H4GQ99525 98 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 RTBDNQ9BSG5 229 aaPredicted RBP2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 EFCAB11Q9BUY7 163 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 EBPLQ9BY08 206 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 SH2D2AQ9NP31 389 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 PLEKHJ1Q9NW61 149 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF586Q9NXT0 402 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 MRM2Q9UI43 246 aaKnown RBP2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 MMP17Q9ULZ9 603 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 PXMP4Q9Y6I8 212 aa2.67□□□□□ -1.98
ECHDC1-217ENST00000488087 BPTFQ12830 3046 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 GREB1Q4ZG55 1949 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ANKRD12Q6UB98 2062 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 IGLV3-16A0A075B6K0 115 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 TRBV9A0A0B4J1U6 114 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 DUXBA0A1W2PPF3 345 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ARL5CA6NH57 179 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 C17orf112F2Z3M2 114 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 NPIPB7O75200 414 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 PITX3O75364 302 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR2J3O76001 311 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 SLC25A14O95258 325 aaPredicted RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 IFNA1P01562 189 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 IGLV1-47P01700 117 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 HLA-HP01893 362 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 PRH1P02810 166 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 P04436 131 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 CTSDP07339 412 aaPredicted RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 IFI6P09912 130 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 LINC00869P0C866 280 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 BCL2P10415 239 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ERGP11308 486 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 IGFBP3P17936 291 aaPredicted RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 GALR1P47211 349 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 FXYD6P3P58550 94 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 TAS2R30P59541 319 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 CKS1BP61024 79 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 RHOBP62745 196 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 GNB2P62879 340 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 CCL20P78556 96 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 RAB31Q13636 194 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 PDGFRLQ15198 375 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 MSMO1Q15800 293 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 BATFQ16520 125 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 HIST3H3Q16695 136 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 MPV17LQ2QL34 196 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 TMEM249Q2WGJ8 235 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 SPATA45Q537H7 98 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 TCEAL5Q5H9L2 206 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 CLEC12AQ5QGZ9 265 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 FKBP1CQ5VVH2 108 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OTPQ5XKR4 325 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 UNQ5815/PRO19632Q6UWF5 114 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 WDR82Q6UXN9 313 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 C12orf54Q6X4T0 127 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 Q6ZN92 141 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 COX15Q7KZN9 410 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 CMTM8Q8IZV2 173 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 FAM58AQ8N1B3 248 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ZNF433Q8N7K0 673 aaPredicted RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 LRRC75AQ8NAA5 344 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ST6GALNAC3Q8NDV1 305 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR52R1Q8NGF1 315 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR5A1Q8NGJ0 315 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR9G4Q8NGQ1 327 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR8S1Q8NH09 359 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR4K13Q8NH42 304 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 OR5AK3PQ8NH89 298 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 FAM213BQ8TBF2 198 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 SLC25A40Q8TBP6 338 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 RNF133Q8WVZ7 376 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 STARD4Q96DR4 205 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 PGLYRP4Q96LB8 373 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 RARRES2Q99969 163 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 PRSS27Q9BQR3 290 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 WFDC6Q9BQY6 131 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 LPAR5Q9H1C0 372 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 ST20Q9HBF5 79 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 FAM206AQ9NX38 181 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 JPT1Q9UK76 154 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 MCTS1Q9ULC4 181 aaKnown RBP2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 URGCP-MRPS24S4R325 110 aa2.66□□□□□ -1.98
ECHDC1-217ENST00000488087 UBR3Q6ZT12 1888 aa2.65□□□□□ -1.98
ECHDC1-217ENST00000488087 ADAMTSL1Q8N6G6 1762 aa2.65□□□□□ -1.99
ECHDC1-217ENST00000488087 TRAV38-1A0A0B4J264 116 aa2.65□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A0J9YY10 115 aa2.65□□□□□ -1.99
ECHDC1-217ENST00000488087 CXorf51AA0A1B0GTR3 108 aa2.65□□□□□ -1.99
ECHDC1-217ENST00000488087 A0A1B0GX78 115 aa2.65□□□□□ -1.99
ECHDC1-217ENST00000488087 IGSF23A1L1A6 192 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms