RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 FOXH1O75593 365 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 DPM2O94777 84 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 GAGE1Q13065 139 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 TM4SF20Q53R12 229 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 MBNL2Q5VZF2 373 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 IFI27L1Q96BM0 104 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 RAX2Q96IS3 184 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 RTN4RQ9BZR6 473 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 SEMA5BQ9P283 1151 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 HIGD1CA8MV81 97 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 FAM157AC9JC47 383 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 CGAP01215 116 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 GPX1P07203 203 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 FCGR2BP31994 310 aaPredicted RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 FXYD3Q14802 87 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 UNQ5815/PRO19632Q6UWF5 114 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 FOXL2NBQ6ZUU3 175 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 SLC25A45Q8N413 288 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 OCC1Q8TAD7 63 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 EEF1AKMT3Q96AZ1 226 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 MRPL16Q9NX20 251 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 RPUSD1Q9UJJ7 312 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 SNRNP200O75643 2136 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 MGPP08493 103 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 FAM159AQ6UWV7 190 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 LINC00305Q7Z4B0 112 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 ZNF479Q96JC4 524 aa5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 SRSF8Q9BRL6 282 aaKnown RBP5.17□□□□□ -1.58
PRPF4B-205ENST00000480058 A0A1W2PR80 420 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 TCRBV4S1A1TA0A5B7 111 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 A8MWV9 139 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 DUTP33316 252 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 LOXL3P58215 753 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 CCL8P80075 99 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 RGPD2P0DJD1 1756 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SRRM5B3KS81 715 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 PRSS12P56730 875 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 S100A7L2Q5SY68 101 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 ZNF841Q6ZN19 808 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 RPRMLQ8N4K4 120 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SSBP3Q9BWW4 388 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 NOTCH2Q04721 2471 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 PGPEP1LA6NFU8 196 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 H3BVH4 76 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 ATP5G3P48201 142 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 FAM71F2Q6NXP2 309 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 NUDT11Q96G61 164 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 GFI1Q99684 422 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 MOB4Q9Y3A3 225 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 RNF115Q9Y4L5 304 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SIPA1L3O60292 1781 aaPredicted RBP5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SHROOM3Q8TF72 1996 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SNRPD3P62318 126 aaKnown RBP5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SRSF1Q07955 248 aaKnown RBP eCLIP5.16□□□□□ -1.581e-8■■■□□ 16.3
PRPF4B-205ENST00000480058 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 FAM231DQ6ZW35 169 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SPRED2Q7Z698 418 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SLC22A18ASQ8N1D0 253 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SGK494Q96LW2 274 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 GFRA4Q9GZZ7 299 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 PCNX1Q96RV3 2341 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 TRAV8-6A0A0B4J262 113 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 TRAV24A0A0B4J272 114 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 PPIAL4CA0A0B4J2A2 164 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 ZIC3O60481 467 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 PPIAL4GP0DN37 164 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 ZNF497Q6ZNH5 498 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 TPRX1Q8N7U7 411 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 TMEM167AQ8TBQ9 72 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 SCGB3A1Q96QR1 104 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 LY75O60449 1722 aa5.16□□□□□ -1.58
PRPF4B-205ENST00000480058 A8MWP6 167 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 EFNB3Q15768 340 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 LDLRAD2Q5SZI1 272 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 HCP5Q6MZN7 132 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 NEU4Q8WWR8 484 aaPredicted RBP5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 NRTNQ99748 197 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 GGTLC1Q9BX51 225 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 IGHV2-5P01817 119 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 TREML4Q6UXN2 200 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 PKDREJQ9NTG1 2253 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 H3BUT2 72 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 IGFBP2P18065 325 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 GAGE2BQ13066 116 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 GAGE2EQ4V326 116 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 ZNF826PQ6ZT77 177 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 NEU1Q99519 415 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 TIMP4Q99727 224 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.58
PRPF4B-205ENST00000480058 SCO2A0A1W2PP80 73 aa5.15□□□□□ -1.59
PRPF4B-205ENST00000480058 MYOD1P15172 320 aa5.15□□□□□ -1.59
PRPF4B-205ENST00000480058 PSG7Q13046 419 aa5.15□□□□□ -1.59
PRPF4B-205ENST00000480058 PDE6HQ13956 83 aa5.15□□□□□ -1.59
PRPF4B-205ENST00000480058 ACTL10Q5JWF8 245 aa5.15□□□□□ -1.59
PRPF4B-205ENST00000480058 FAM90A2PQ658T7 463 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms