RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DNASE2O00115 360 aaPredicted RBP11.66□□□□□ -0.54
DDX56-210ENST00000479440 SULT1C2O00338 296 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 SPP1P10451 314 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 MYL9P24844 172 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 OR10A3P58181 314 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 GNG2P59768 71 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 ARPC4P59998 168 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 ERVK-16P61578 105 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 SOHLH1Q5JUK2 328 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 ZNF773Q6PK81 442 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 OR13F1Q8NGS4 319 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 NUDCD2Q8WVJ2 157 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 GINS3Q9BRX5 216 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 COMMD9Q9P000 198 aa11.66□□□□□ -0.54
DDX56-210ENST00000479440 MUC4Q99102 2169 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 ZNF705EA8MWA4 302 aaPredicted RBP11.65□□□□□ -0.54
DDX56-210ENST00000479440 CTSGP08311 255 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
DDX56-210ENST00000479440 DGCR14Q96DF8 476 aaKnown RBP11.65□□□□□ -0.54
DDX56-210ENST00000479440 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 PKD1P98161 4303 aa11.65□□□□□ -0.54
DDX56-210ENST00000479440 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 TMEM235A6NFC5 223 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 SCGNO76038 276 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 RCN1Q15293 331 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
DDX56-210ENST00000479440 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 TRAV1-2A0A0B4J238 106 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 CASQ2O14958 399 aaPredicted RBP11.63□□□□□ -0.55
DDX56-210ENST00000479440 PPYP01298 95 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 RAB3BP20337 219 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 FCGR2CP31995 323 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 UBE2DNLQ8IWF7 75 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 OR51H1Q8NH63 302 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 TMEM56Q96MV1 263 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 TXN2Q99757 166 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 SLC5A7Q9GZV3 580 aa11.63□□□□□ -0.55
DDX56-210ENST00000479440 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
DDX56-210ENST00000479440 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
DDX56-210ENST00000479440 MARCH11A6NNE9 402 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 IFNA10P01566 189 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 C4BPBP20851 252 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 MFAP4P55083 255 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
DDX56-210ENST00000479440 AADACL3Q5VUY0 350 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
DDX56-210ENST00000479440 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 ZNF414Q96IQ9 312 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 VCXQ9H320 206 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 TBC1D24Q9ULP9 559 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 OR51B2Q9Y5P1 312 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 X6R8D5 127 aa11.62□□□□□ -0.55
DDX56-210ENST00000479440 GNG7O60262 68 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 OR1P1Q8NH06 330 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 BORCS5Q969J3 196 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 SLC25A46Q96AG3 418 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 MISP3Q96FF7 219 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 MGLLQ99685 303 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 CELA1Q9UNI1 258 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 HSPG2P98160 4391 aa11.61□□□□□ -0.55
DDX56-210ENST00000479440 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 RGS10O43665 173 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 SSX5O60225 188 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 SNAPC5O75971 98 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 IFNA21P01568 189 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 IFNA17P01571 189 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 GIG44P09565 113 aaPredicted RBP11.6□□□□□ -0.55
DDX56-210ENST00000479440 NPY1RP25929 384 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 FXYD4P59646 89 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 C12orf74Q32Q52 190 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 FAM24BQ8N5W8 94 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
DDX56-210ENST00000479440 ZNF818PQ6ZRF7 136 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 ZNF767PQ75MW2 155 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 TMEM17Q86X19 198 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 GRAMD2BQ96HH9 432 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 FKBP11Q9NYL4 201 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
DDX56-210ENST00000479440 I3L2K1 104 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 CD74P04233 296 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 OGFRL1Q5TC84 451 aaPredicted RBP11.58□□□□□ -0.56
DDX56-210ENST00000479440 UBE2UQ5VVX9 321 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms